RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CALRP27797 417 aaKnown RBP3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 ACADLP28330 430 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 HOXA13P31271 388 aaPredicted RBP3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 PSMB10P40306 273 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 GARSP41250 739 aaKnown RBP3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 RPL36AP83881 106 aaKnown RBP3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 RELQ04864 619 aaPredicted RBP3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 SREBF2Q12772 1141 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 SPECC1Q5M775 1068 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 IRAK1BP1Q5VVH5 260 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 FAM205BPQ63HN1 556 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 PMS2CLQ68D20 193 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 KIAA0930Q6ICG6 404 aaPredicted RBP3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 PAPD4Q6PIY7 484 aaKnown RBP3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 SATL1Q86VE3 508 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 DCP1BQ8IZD4 617 aaKnown RBP3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 C1orf87Q8N0U7 546 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 ACVR1CQ8NER5 493 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 OR5R1Q8NH85 324 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 SLC20A1Q8WUM9 679 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 SECTM1Q8WVN6 248 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 C1QTNF1Q9BXJ1 281 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 MAK16Q9BXY0 300 aaKnown RBP3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 TMEM30AQ9NV96 361 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 FBXL17Q9UF56 701 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 POU2F3Q9UKI9 436 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 PADI3Q9ULW8 664 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 PCDHAC2Q9Y5I4 1007 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 PTPRCP08575 1304 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 CGNL1Q0VF96 1302 aa3.85□□□□□ -1.79
SMARCA1-204ENST00000478420 A0A1B0GUV1 79 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 BICDL2A1A5D9 508 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 CDRT15L2A8MXV6 281 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 FAM90A26D6RGX4 464 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 TULP2O00295 520 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 SMAD9O15198 467 aaKnown RBP3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 GFPT2O94808 682 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 KCNK5O95279 499 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 RPN1P04843 607 aaKnown RBP3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 MYOD1P15172 320 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 GABRB1P18505 474 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 HOXD13P35453 343 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 MSH2P43246 934 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 GPR143P51810 404 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 CLDN20P56880 219 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 EEF1A1P68104 462 aaKnown RBP3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 MC1RQ01726 317 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 TMEM35AQ53FP2 167 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 EEF1A1P5Q5VTE0 462 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 NSUN5P2Q63ZY6 315 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 WBP2NLQ6ICG8 309 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 LCN10Q6JVE6 187 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 GFRALQ6UXV0 394 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 CFAP77Q6ZQR2 320 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 C18orf65Q6ZTR6 163 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 CCDC190Q86UF4 302 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 TMEM219Q86XT9 240 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 KMT5CQ86Y97 462 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.84□□□□□ -1.792e-7■■■□□ 15
SMARCA1-204ENST00000478420 NAGSQ8N159 534 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 POC1AQ8NBT0 407 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 LNX1Q8TBB1 728 aaPredicted RBP3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 UTP15Q8TED0 518 aaKnown RBP3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 TRPC4APQ8TEL6 797 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 SORCS1Q8WY21 1168 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 CCDC34Q96HJ3 373 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 PCYT2Q99447 389 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 SEMA3CQ99985 751 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 GHITMQ9H3K2 345 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 EVA1AQ9H8M9 152 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 VPS28Q9UK41 221 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 ZNF215Q9UL58 517 aaPredicted RBP3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 NENFQ9UMX5 172 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 PROCRQ9UNN8 238 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 CMAHPQ9Y471 501 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 LRP12Q9Y561 859 aa3.84□□□□□ -1.79
SMARCA1-204ENST00000478420 ARHGEF40Q8TER5 1519 aa3.84□□□□□ -1.8
SMARCA1-204ENST00000478420 PRAC2D3DTV9 90 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 PRSS44E7EML9 344 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 BUB3O43684 328 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 TMCC2O75069 709 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 TSPAN9O75954 239 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 TPPPO94811 219 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 CDH1P12830 882 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 HLA-DOBP13765 273 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 ITGA2P17301 1181 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 ALOX12P18054 663 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 POLR2CP19387 275 aaPredicted RBP3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 PON1P27169 355 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 AMPHP49418 695 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 ERVFC1-1P60608 527 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 ISL1P61371 349 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 CREB5Q02930 508 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 TROAPQ12815 778 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 PRKG2Q13237 762 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 GTF2H2Q13888 395 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 ZNF234Q14588 700 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 MEA1Q16626 185 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 SYT16Q17RD7 645 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 DUSP28Q4G0W2 176 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms