RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 IL10RAQ13651 578 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 TCP11X2Q5H9J9 407 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 KLHL6Q8WZ60 621 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 WDR24Q96S15 920 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 SLC29A3Q9BZD2 475 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 ACSS2Q9NR19 701 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 SAMSN1Q9NSI8 373 aaKnown RBP11.21□□□□□ -0.61
BRCA1-213ENST00000476777 SEPT11Q9NVA2 429 aaKnown RBP11.21□□□□□ -0.61
BRCA1-213ENST00000476777 LUZP4Q9P127 313 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 ZGRF1Q86YA3 2104 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 PIKFYVEQ9Y2I7 2098 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 ARGFXA6NJG6 315 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 FADS2P1A8MWK0 482 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 GRID2O43424 1007 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 NUAK1O60285 661 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 MAFKO60675 156 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 LRCH4O75427 683 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 CEACAM4O75871 244 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 RASSF9O75901 435 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 AMD1P17707 334 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 NELFEP18615 380 aaKnown RBP11.2□□□□□ -0.62
BRCA1-213ENST00000476777 MIPP30301 263 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 SLC19A1P41440 591 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 MMP13P45452 471 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 CAPZBP47756 277 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 ZNF135P52742 658 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-213ENST00000476777 MAMLD1Q13495 774 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 IHHQ14623 411 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 CHRNA6Q15825 494 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 CACHD1Q5VU97 1274 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 PWWP2BQ6NUJ5 590 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 FAM199XQ6PEV8 388 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-213ENST00000476777 SYVN1Q86TM6 617 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 PHYKPLQ8IUZ5 450 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 PSTKQ8IV42 348 aaKnown RBP11.2□□□□□ -0.62
BRCA1-213ENST00000476777 SRRM1Q8IYB3 904 aaKnown RBP11.2□□□□□ -0.62
BRCA1-213ENST00000476777 MCOLN2Q8IZK6 566 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 NDUFAF2Q8N183 169 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 BBS5Q8N3I7 341 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 AOPEPQ8N6M6 819 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 C19orf60Q96EN9 201 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 MFRPQ9BY79 579 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 SLAMF7Q9NQ25 335 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 KLC4Q9NSK0 619 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 ETNK2Q9NVF9 386 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 TAB2Q9NYJ8 693 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 ZNF624Q9P2J8 865 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-213ENST00000476777 ZNF451Q9Y4E5 1061 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 PCDHGB7Q9Y5F8 929 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 ADGRG1Q9Y653 693 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 NAV3Q8IVL0 2385 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 CSMD2Q7Z408 3487 aa11.2□□□□□ -0.62
BRCA1-213ENST00000476777 DPM1O60762 260 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 CLDN7O95471 211 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 VIPP01282 170 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 ZNF8P17098 575 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-213ENST00000476777 VARSP26640 1264 aaKnown RBP11.19□□□□□ -0.62
BRCA1-213ENST00000476777 EEF1GP26641 437 aaKnown RBP11.19□□□□□ -0.62
BRCA1-213ENST00000476777 RIPPLY3P57055 190 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 DPCR1Q3MIW9 517 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 HENMT1Q5T8I9 393 aaKnown RBP11.19□□□□□ -0.62
BRCA1-213ENST00000476777 MARC1Q5VT66 337 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 SLC6A19Q695T7 634 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 ACAD10Q6JQN1 1059 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 FAM92BQ6ZTR7 304 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 RAVER1Q8IY67 606 aaKnown RBP11.19□□□□□ -0.62
BRCA1-213ENST00000476777 RBMXL3Q8N7X1 1067 aaKnown RBP11.19□□□□□ -0.62
BRCA1-213ENST00000476777 RSC1A1Q92681 617 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 PNPLA2Q96AD5 504 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 FCRL4Q96PJ5 515 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 AGPAT1Q99943 283 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 CARD9Q9H257 536 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 OSGEPL1Q9H4B0 414 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 PDE7BQ9NP56 450 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 MAP10Q9P2G4 905 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 ATXN10Q9UBB4 475 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 RARRES3Q9UL19 164 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 SLC5A6Q9Y289 635 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 SIK3Q9Y2K2 1263 aa11.19□□□□□ -0.62
BRCA1-213ENST00000476777 AKAP9Q99996 3911 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 KRT86O43790 486 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 PRPSAP2O60256 369 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 CBX6O95503 412 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 PRLP01236 227 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 FOLR1P15328 257 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 LPOP22079 712 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-213ENST00000476777 AMPD1P23109 780 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 PTGIRP43119 386 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 SPINT3P49223 89 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 EPHB1P54762 984 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 CDH6P55285 790 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 RPS15P62841 145 aaKnown RBP11.18□□□□□ -0.62
BRCA1-213ENST00000476777 TUBB3Q13509 450 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 NR6A1Q15406 480 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 SYCP1Q15431 976 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 PLEKHA7Q6IQ23 1121 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 IRGCQ6NXR0 463 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 TMCO3Q6UWJ1 677 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 TRIM48Q8IWZ4 208 aa11.18□□□□□ -0.62
BRCA1-213ENST00000476777 ATPAF2Q8N5M1 289 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms