RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 CPNE8Q86YQ8 564 aa13.95□□□□□ -0.18
ATG9A-220ENST00000475339 ING2Q9H160 280 aa13.95□□□□□ -0.18
ATG9A-220ENST00000475339 LRRC19Q9H756 370 aa13.95□□□□□ -0.18
ATG9A-220ENST00000475339 ACSS2Q9NR19 701 aa13.95□□□□□ -0.18
ATG9A-220ENST00000475339 ST14Q9Y5Y6 855 aa13.95□□□□□ -0.18
ATG9A-220ENST00000475339 ANKRD36A6QL64 1941 aa13.95□□□□□ -0.18
ATG9A-220ENST00000475339 ZG16O60844 167 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 TMCC1O94876 653 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 MAP3K6O95382 1288 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 RECKO95980 971 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 FUCA1P04066 466 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 TNNT1P13805 278 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 AMPD1P23109 780 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 PAPOLAP51003 745 aaKnown RBP13.94□□□□□ -0.18
ATG9A-220ENST00000475339 NAP1L1P55209 391 aaKnown RBP13.94□□□□□ -0.18
ATG9A-220ENST00000475339 RHOAP61586 193 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 FOXM1Q08050 763 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 ELP6Q0PNE2 266 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 DNASE1L3Q13609 305 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 AGERQ15109 404 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 PDK2Q15119 407 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 TCEAL1Q15170 157 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 RAD9BQ6WBX8 426 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 TXLNBQ8N3L3 684 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 NPWQ8N729 165 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 OR10G6Q8NH81 332 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 STAMBPL1Q96FJ0 436 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 GDAP1L1Q96MZ0 367 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 ZNF670Q9BS34 389 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 SLC39A8Q9C0K1 460 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 KLC2Q9H0B6 622 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 PCDH12Q9NPG4 1184 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 KLHL3Q9UH77 587 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 PCDHGA6Q9Y5G7 932 aa13.94□□□□□ -0.18
ATG9A-220ENST00000475339 PCSK5Q92824 1860 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 LRRD1A4D1F6 860 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 PRAMEF11O60813 436 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 IGSF6O95976 241 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 KRT1P04264 644 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 HOXC4P09017 264 aaPredicted RBP13.93□□□□□ -0.18
ATG9A-220ENST00000475339 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 DPYSL3Q14195 570 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 PLEKHN1Q494U1 663 aaPredicted RBP13.93□□□□□ -0.18
ATG9A-220ENST00000475339 INO80DQ53TQ3 878 aaPredicted RBP13.93□□□□□ -0.18
ATG9A-220ENST00000475339 WDR74Q6RFH5 385 aaPredicted RBP13.93□□□□□ -0.18
ATG9A-220ENST00000475339 RHOT1Q8IXI2 618 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 ATPAF2Q8N5M1 289 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 NETO2Q8NC67 525 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 ACRBPQ8NEB7 543 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 THAP4Q8WY91 577 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 NCSTNQ92542 709 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 SLC38A3Q99624 504 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 ACTL8Q9H568 366 aa13.93□□□□□ -0.18
ATG9A-220ENST00000475339 TRBV23OR9-2A0A075B6M9 112 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 A0A0A6YYK5 440 aaPredicted RBP13.92□□□□□ -0.18
ATG9A-220ENST00000475339 GOLGA6L3A6NEY3 463 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 J3KR12 359 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 PALMO75781 387 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 KIAA0754O94854 1291 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 SNRPB2P08579 225 aaKnown RBP13.92□□□□□ -0.18
ATG9A-220ENST00000475339 CD48P09326 243 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 COMTP21964 271 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 ITGA3P26006 1051 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 TRIM23P36406 574 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 GNPDA1P46926 289 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 PER3P56645 1201 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 RAD51Q06609 339 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 UGP2Q16851 508 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 ATP13A4Q4VNC1 1196 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 AFMIDQ63HM1 303 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 ARHGAP12Q8IWW6 846 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 IQCKQ8N0W5 287 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 PELI3Q8N2H9 469 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 FDCSPQ8NFU4 85 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.92□□□□□ -0.18
ATG9A-220ENST00000475339 CT55Q8WUE5 264 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 NSMCE1Q8WV22 266 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 PTCD2Q8WV60 388 aaKnown RBP13.92□□□□□ -0.18
ATG9A-220ENST00000475339 CALR3Q96L12 384 aaKnown RBP13.92□□□□□ -0.18
ATG9A-220ENST00000475339 RUFY1Q96T51 708 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 CINPQ9BW66 212 aaPredicted RBP13.92□□□□□ -0.18
ATG9A-220ENST00000475339 WDR26Q9H7D7 661 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 ETNK2Q9NVF9 386 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 TRNAU1APQ9NX07 287 aaKnown RBP13.92□□□□□ -0.18
ATG9A-220ENST00000475339 SIDT1Q9NXL6 827 aaKnown RBP13.92□□□□□ -0.18
ATG9A-220ENST00000475339 DDX56Q9NY93 547 aaKnown RBP13.92□□□□□ -0.18
ATG9A-220ENST00000475339 TFR2Q9UP52 801 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 MFHAS1Q9Y4C4 1052 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 HYOU1Q9Y4L1 999 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 PCDHGB7Q9Y5F8 929 aa13.92□□□□□ -0.18
ATG9A-220ENST00000475339 DCHS2Q6V1P9 2916 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 INSIG1O15503 277 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 PSTPIP1O43586 416 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 NRDCO43847 1150 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 BUB1BO60566 1050 aaPredicted RBP13.91□□□□□ -0.18
ATG9A-220ENST00000475339 RECQL5O94762 991 aaPredicted RBP13.91□□□□□ -0.18
ATG9A-220ENST00000475339 CCNYL3P0C7X3 344 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 GARSP41250 739 aaKnown RBP13.91□□□□□ -0.18
ATG9A-220ENST00000475339 SUOXP51687 545 aa13.91□□□□□ -0.18
ATG9A-220ENST00000475339 ARSEP51690 589 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms