RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 SLC22A15Q8IZD6 547 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 AADATQ8N5Z0 425 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 PAF1Q8N7H5 531 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 OR9I1Q8NGQ6 314 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 KCTD4Q8WVF5 259 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 LPAR1Q92633 364 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 RPL3LQ92901 407 aaKnown RBP8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 NSMCE2Q96MF7 247 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 FCRL3Q96P31 734 aaPredicted RBP8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 ZSCAN5AQ9BUG6 496 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 AMBRA1Q9C0C7 1298 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 PRDM8Q9NQV8 689 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 GLTPQ9NZD2 209 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 DNAJB9Q9UBS3 223 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 KLHL21Q9UJP4 597 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 ERVW-1Q9UQF0 538 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 ORC6Q9Y5N6 252 aa8.96□□□□□ -0.97
SMARCE1-207ENST00000469334 MYO18AQ92614 2054 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 A0A087X1B8 175 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 ZCWPW2A0A1B0GU75 182 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 ATP6AP2A0A1C7CYW4 349 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 OR2A25A4D2G3 310 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 RGS10O43665 173 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 SERPINI2O75830 405 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 NPPAP01160 153 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 PDGFAP04085 211 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 DBTP11182 482 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 PSKH1P11801 424 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 TCF3P15923 654 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 CAPN3P20807 821 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 CCNCP24863 283 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 FMO4P31512 558 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 TIE1P35590 1138 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 MAGEA11P43364 429 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 CHRNB3Q05901 458 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 GRM3Q14832 879 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 PPP1R3AQ16821 1122 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 KIF19Q2TAC6 998 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 METTL2BQ6P1Q9 378 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 TMEM179Q6ZVK1 233 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 SLC26A9Q7LBE3 791 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 TAS1R3Q7RTX0 852 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 CCDC190Q86UF4 302 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 FAM35AQ86V20 835 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 CENPLQ8N0S6 344 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 TXNDC5Q8NBS9 432 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 ST13P5Q8NFI4 369 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 RDM1Q8NG50 284 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 IPCEF1Q8WWN9 437 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 RXFP2Q8WXD0 754 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 MOCOSQ96EN8 888 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 ZNF578Q96N58 590 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 SNRNP25Q9BV90 132 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 ITPAQ9BY32 194 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 ROGDIQ9GZN7 287 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 OSBPL2Q9H1P3 480 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 SMOC2Q9H3U7 446 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 ACOT13Q9NPJ3 140 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 DDX4Q9NQI0 724 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 KCNH7Q9NS40 1196 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 MAT2BQ9NZL9 334 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 BFARQ9NZS9 450 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 GABBR1Q9UBS5 961 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 TJP2Q9UDY2 1190 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 GTF2IRD1Q9UHL9 959 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 PRR12Q9ULL5 1215 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 MAGED2Q9UNF1 606 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 SNX7Q9UNH6 387 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 KCNE2Q9Y6J6 123 aa8.96□□□□□ -0.98
SMARCE1-207ENST00000469334 NRXN2Q9P2S2 1712 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 GRXCR2A6NFK2 248 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 FAM25EA8MYX2 175 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 ATP6V1G2-DDX39BF2Z307 99 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 H3BQ06 376 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 EEF2KO00418 725 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 AIREO43918 545 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 KCNJ13O60928 360 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 CPNE3O75131 537 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 GH2P01242 217 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 FTH1P02794 183 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 RBP1P09455 135 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 PDGFRAP16234 1089 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 ZNF30P17039 623 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 ATF3P18847 181 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 CD6P30203 668 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 SDC4P31431 198 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 UQCRC1P31930 480 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 CBX5P45973 191 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 MASP1P48740 699 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 ACOT2P49753 483 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 CACNB3P54284 484 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 USP10Q14694 798 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 ACAP2Q15057 778 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 AAK1Q2M2I8 961 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 BCL7AQ4VC05 210 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 PYCR3Q53H96 274 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 OR5B17Q8NGF7 314 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 CERKQ8TCT0 537 aa8.95□□□□□ -0.98
SMARCE1-207ENST00000469334 DDX17Q92841 729 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms