RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ZNF438Q7Z4V0 828 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 TMC3Q7Z5M5 1100 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 PLXDC1Q8IUK5 500 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 CDKL3Q8IVW4 592 aaPredicted RBP8.77□□□□□ -1.01
LDB1-203ENST00000461873 KATNAL2Q8IYT4 538 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 SYCE1Q8N0S2 351 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 SFRP1Q8N474 314 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 UBL4BQ8N7F7 174 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 IPMKQ8NFU5 416 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 SPATA22Q8NHS9 363 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 SLC37A2Q8TED4 501 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 PATE1Q8WXA2 126 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 ANP32BQ92688 251 aaKnown RBP8.77□□□□□ -1.01
LDB1-203ENST00000461873 GLYATL1Q969I3 302 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 SGF29Q96ES7 293 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 WBP1Q96G27 269 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 SCARF2Q96GP6 870 aaPredicted RBP8.77□□□□□ -1.01
LDB1-203ENST00000461873 COX14Q96I36 57 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 TEKT5Q96M29 485 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 PLEKHG4BQ96PX9 1271 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 SMIM14Q96QK8 99 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 NUDT22Q9BRQ3 303 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 EFHD1Q9BUP0 239 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 B3GNT4Q9C0J1 378 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 BPIFA1Q9NP55 256 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 SARS2Q9NP81 518 aaKnown RBP8.77□□□□□ -1.01
LDB1-203ENST00000461873 ATXN10Q9UBB4 475 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 KLHL3Q9UH77 587 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 DNAJC16Q9Y2G8 782 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 AAR2Q9Y312 384 aaKnown RBP8.77□□□□□ -1.01
LDB1-203ENST00000461873 PLEKHM1Q9Y4G2 1056 aa8.77□□□□□ -1.01
LDB1-203ENST00000461873 HEMK1Q9Y5R4 338 aaPredicted RBP8.77□□□□□ -1.01
LDB1-203ENST00000461873 CHD6Q8TD26 2715 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 IGHV1OR21-1A0A087WYE8 117 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 IGHV5-10-1A0A0J9YXX1 117 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 CCDC66A2RUB6 948 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 C3orf70A6NLC5 250 aaPredicted RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 EFCAB7A8K855 629 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 FADS2P1A8MWK0 482 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 K7ENP7 123 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 PPM1DO15297 605 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 STX7O15400 261 aaKnown RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 KCNJ13O60928 360 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 DNAJC6O75061 913 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 PPFIA2O75334 1257 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 RASSF9O75901 435 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 GAS8O95995 478 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 SOD1P00441 154 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 EPOP01588 193 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 FUCA1P04066 466 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 MMP2P08253 660 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 RALBP11234 206 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 ZNF8P17098 575 aaPredicted RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 NFKB1P19838 968 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 HLA-DPA1P20036 260 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 MSH3P20585 1137 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 CD1CP29017 333 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 SPAM1P38567 509 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 ARL4DP49703 201 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 PDX1P52945 283 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 EPHA4P54764 986 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 HADHBP55084 474 aaKnown RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 WNT3AP56704 352 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 RWDD2BP57060 319 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 PDE1BQ01064 536 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 XRCC4Q13426 336 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 KRT33BQ14525 404 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 NR1D2Q14995 579 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 PRKD1Q15139 912 aaPredicted RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 LDLRAP1Q5SW96 308 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 ZNF449Q6P9G9 518 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 KLHL35Q6PF15 583 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 IYDQ6PHW0 289 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 INO80CQ6PI98 192 aaPredicted RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 CEACAM20Q6UY09 585 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 B4GALNT4Q76KP1 1039 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 C17orf82Q86X59 251 aaPredicted RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 ZNF761Q86XN6 746 aaPredicted RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 SLITRK4Q8IW52 837 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 SFTPA2Q8IWL1 248 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 RBM12BQ8IXT5 1001 aaKnown RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 BEND7Q8N7W2 519 aaPredicted RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 CNTD1Q8N815 330 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 ART4Q93070 314 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 DCUN1D1Q96GG9 259 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 OLFM3Q96PB7 478 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 TEFMQ96QE5 360 aaKnown RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 PANX2Q96RD6 677 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 ZPBPQ9BS86 351 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 HEMGNQ9BXL5 484 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 FAM117AQ9C073 453 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 ARFGAP3Q9NP61 516 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 SAE1Q9UBE0 346 aaPredicted RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 CPNE7Q9UBL6 633 aa8.76□□□□□ -1.01
LDB1-203ENST00000461873 EPN1Q9Y6I3 576 aaPredicted RBP8.76□□□□□ -1.01
LDB1-203ENST00000461873 hCG_1818297A0A087WSY0 165 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 GLYATL1P3A0A0U1RQE8 302 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 F5H423 210 aaPredicted RBP8.75□□□□□ -1.01
LDB1-203ENST00000461873 APOC4-APOC2K7ER74 178 aa8.75□□□□□ -1.01
LDB1-203ENST00000461873 POLR1CO15160 346 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms