RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 TDRD12Q587J7 1177 aaKnown RBP3.02□□□□□ -1.93
HDAC6-212ENST00000461608 ZDHHC20Q5W0Z9 365 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 FAM109BQ6ICB4 259 aaPredicted RBP3.02□□□□□ -1.93
HDAC6-212ENST00000461608 LCN10Q6JVE6 187 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 SLC36A4Q6YBV0 504 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 B3GNT6Q6ZMB0 384 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 CCNI2Q6ZMN8 369 aaPredicted RBP3.02□□□□□ -1.93
HDAC6-212ENST00000461608 CTU1Q7Z7A3 348 aaKnown RBP3.02□□□□□ -1.93
HDAC6-212ENST00000461608 GPR180Q86V85 440 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 PM20D2Q8IYS1 436 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 TTC30BQ8N4P2 665 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 AFAP1Q8N556 730 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 PCDH20Q8N6Y1 951 aaKnown RBP3.02□□□□□ -1.93
HDAC6-212ENST00000461608 TDRD5Q8NAT2 981 aaKnown RBP3.02□□□□□ -1.93
HDAC6-212ENST00000461608 SLC38A9Q8NBW4 561 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 PAPD5Q8NDF8 572 aaKnown RBP3.02□□□□□ -1.93
HDAC6-212ENST00000461608 HM13Q8TCT9 377 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 APBB2Q92870 758 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 TTC14Q96N46 770 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 ZMAT2Q96NC0 199 aaKnown RBP3.02□□□□□ -1.93
HDAC6-212ENST00000461608 QRFPRQ96P65 431 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 NEK1Q96PY6 1258 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 SPAG5Q96R06 1193 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 OR1F2PQ96R84 312 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 GAD1Q99259 594 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 CCDC106Q9BWC9 280 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 C1QTNF7Q9BXJ2 289 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 VPS33BQ9H267 617 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 SLCO5A1Q9H2Y9 848 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 KCNK15Q9H427 330 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 ZWILCHQ9H900 591 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 GIMAP2Q9UG22 337 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 OSGIN1Q9UJX0 560 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 MYO6Q9UM54 1294 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 NME7Q9Y5B8 376 aa3.02□□□□□ -1.93
HDAC6-212ENST00000461608 FAM90A10PA6NDY2 464 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 BECN2A8MW95 431 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 CCDC188H7C350 402 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 TNFRSF13BO14836 293 aaPredicted RBP3.01□□□□□ -1.93
HDAC6-212ENST00000461608 ADAMDEC1O15204 470 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 NDUFS7O75251 213 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 RSL1D1O76021 490 aaKnown RBP3.01□□□□□ -1.93
HDAC6-212ENST00000461608 BMP15O95972 392 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 SCP2P22307 547 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 UGT1A1P22309 533 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 PEX5P50542 639 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 RAB28P51157 221 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 CCR3P51677 355 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 ZNF41P51814 821 aaPredicted RBP3.01□□□□□ -1.93
HDAC6-212ENST00000461608 CTSCP53634 463 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 CSE1LP55060 971 aaKnown RBP3.01□□□□□ -1.93
HDAC6-212ENST00000461608 TAS2R38P59533 333 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 SPOCK1Q08629 439 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 Q0VFX4 171 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 EFNB3Q15768 340 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 ETFDHQ16134 617 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 CALCRLQ16602 461 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 MEP1AQ16819 746 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 EIF2S3LQ2VIR3 472 aaKnown RBP3.01□□□□□ -1.93
HDAC6-212ENST00000461608 CBWD6Q4V339 395 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 CBWD3Q5JTY5 395 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 C1orf141Q5JVX7 400 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 ARMC4Q5T2S8 1044 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 DUS1LQ6P1R4 473 aaKnown RBP3.01□□□□□ -1.93
HDAC6-212ENST00000461608 BRAT1Q6PJG6 821 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 ZNF704Q6ZNC4 412 aaPredicted RBP3.01□□□□□ -1.93
HDAC6-212ENST00000461608 TECPR1Q7Z6L1 1165 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 SLFN11Q7Z7L1 901 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 VSIG1Q86XK7 387 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 NRROSQ86YC3 692 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 THNSL1Q8IYQ7 743 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 GCSAMQ8N6F7 178 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 EMC1Q8N766 993 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 TC2NQ8N9U0 490 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 XXYLT1Q8NBI6 393 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 ATL1Q8WXF7 558 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 ORAI1Q96D31 301 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 HDAC11Q96DB2 347 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 SLX1AQ9BQ83 275 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 SLC25A33Q9BSK2 321 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 SLC25A23Q9BV35 468 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 MOV10L1Q9BXT6 1211 aaKnown RBP3.01□□□□□ -1.93
HDAC6-212ENST00000461608 RAD21L1Q9H4I0 556 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 ANKZF1Q9H8Y5 726 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 CHMP1AQ9HD42 196 aaPredicted RBP3.01□□□□□ -1.93
HDAC6-212ENST00000461608 PAG1Q9NWQ8 432 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 ELOVL5Q9NYP7 299 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 GDE1Q9NZC3 331 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 LARSQ9P2J5 1176 aaKnown RBP3.01□□□□□ -1.93
HDAC6-212ENST00000461608 WNT16Q9UBV4 365 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 SLC9A2Q9UBY0 812 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 HACL1Q9UJ83 578 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 FBXL2Q9UKC9 423 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 NOL7Q9UMY1 257 aaKnown RBP3.01□□□□□ -1.93
HDAC6-212ENST00000461608 AMDHD2Q9Y303 409 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 GRIP1Q9Y3R0 1128 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 LOXL2Q9Y4K0 774 aa3.01□□□□□ -1.93
HDAC6-212ENST00000461608 ARHGEF40Q8TER5 1519 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 DNAJC9-AS1A6NH13 148 aa3□□□□□ -1.93
HDAC6-212ENST00000461608 C15orf62A8K5M9 175 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms