RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 LILRA5A6NI73 299 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 FADS2P1A8MWK0 482 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 K7EM74 188 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 DDX3XO00571 662 aaKnown RBP eCLIP11.52□□□□□ -0.57
HERC3-207ENST00000452979 MTSS1O43312 755 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 GRID2O43424 1007 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 CLDN7O95471 211 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 ACP5P13686 325 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 SPINT3P49223 89 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 EPHB1P54762 984 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 GSDMDP57764 484 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 ITKQ08881 620 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 GALNT2Q10471 571 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 PIGHQ14442 188 aaPredicted RBP11.52□□□□□ -0.57
HERC3-207ENST00000452979 ASTE1Q2TB18 679 aaPredicted RBP11.52□□□□□ -0.57
HERC3-207ENST00000452979 C4orf17Q53FE4 359 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 TXNRD3NBQ6F5E7 133 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 CCDC13Q8IYE1 715 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 ARRDC2Q8TBH0 407 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 ANP32BQ92688 251 aaKnown RBP11.52□□□□□ -0.57
HERC3-207ENST00000452979 TRIM11Q96F44 468 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 PLEKHG4BQ96PX9 1271 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 FAM83DQ9H4H8 585 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 RCOR3Q9P2K3 495 aaPredicted RBP11.52□□□□□ -0.57
HERC3-207ENST00000452979 KLHL3Q9UH77 587 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 CHKBQ9Y259 395 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 PCDHGA6Q9Y5G7 932 aa11.52□□□□□ -0.57
HERC3-207ENST00000452979 TEX15Q9BXT5 2789 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 A0A087X0T9 212 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 SOWAHDA6NJG2 315 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 GOLGA6L6A8MZA4 724 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 ANKRD66B4E2M5 251 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 GPR89AB7ZAQ6 455 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 MKRN2OSH3BPM6 223 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 MATN3O15232 486 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 SNX2O60749 519 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 FURINP09958 794 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 FAM228BP0C875 321 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 GPR89BP0CG08 455 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 FGF5P12034 268 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 CCNCP24863 283 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 GARSP41250 739 aaKnown RBP11.51□□□□□ -0.57
HERC3-207ENST00000452979 MAPK9P45984 424 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 NOP2P46087 812 aaKnown RBP11.51□□□□□ -0.57
HERC3-207ENST00000452979 MLLT10P55197 1068 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 CCZ1BP86790 482 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 CCZ1P86791 482 aaPredicted RBP11.51□□□□□ -0.57
HERC3-207ENST00000452979 DSC2Q02487 901 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 SLC25A11Q02978 314 aaKnown RBP11.51□□□□□ -0.57
HERC3-207ENST00000452979 ERV3-1Q14264 604 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 PAFAH1B3Q15102 231 aaKnown RBP11.51□□□□□ -0.57
HERC3-207ENST00000452979 TMEM26Q6ZUK4 368 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 APLFQ8IW19 511 aaPredicted RBP11.51□□□□□ -0.57
HERC3-207ENST00000452979 NIPA2Q8N8Q9 360 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 TEX19Q8NA77 164 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 ZNF653Q96CK0 615 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 TSGA13Q96PP4 275 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 ULBP3Q9BZM4 244 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 KCNF1Q9H3M0 494 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 ZNF768Q9H5H4 540 aaKnown RBP11.51□□□□□ -0.57
HERC3-207ENST00000452979 PCDH9Q9HC56 1237 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 LRRC4CQ9HCJ2 640 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 TRIM39Q9HCM9 518 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 PRDM8Q9NQV8 689 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 RBM22Q9NW64 420 aaKnown RBP eCLIP11.51□□□□□ -0.57
HERC3-207ENST00000452979 ZNF624Q9P2J8 865 aaPredicted RBP11.51□□□□□ -0.57
HERC3-207ENST00000452979 ATXN10Q9UBB4 475 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 MYO1AQ9UBC5 1043 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 KCND3Q9UK17 655 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 CROTQ9UKG9 612 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 POLHQ9Y253 713 aa11.51□□□□□ -0.57
HERC3-207ENST00000452979 BZW2Q9Y6E2 419 aaKnown RBP11.51□□□□□ -0.57
HERC3-207ENST00000452979 SSU72P8A0A1W2PR75 194 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 CHUKO15111 745 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 CREG1O75629 220 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 UBXN7O94888 489 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 ZNF8P17098 575 aaPredicted RBP11.5□□□□□ -0.57
HERC3-207ENST00000452979 NR1D1P20393 614 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 CA4P22748 312 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 ARSEP51690 589 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 PMS2P54278 862 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 GFERP55789 205 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 FOXM1Q08050 763 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 NIPAL4Q0D2K0 466 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 IFI16Q16666 785 aaKnown RBP11.5□□□□□ -0.57
HERC3-207ENST00000452979 ANKRD20A8PQ5CZ79 823 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 TIGD7Q6NT04 549 aaPredicted RBP11.5□□□□□ -0.57
HERC3-207ENST00000452979 RAD9BQ6WBX8 426 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 ASB18Q6ZVZ8 466 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 PHYKPLQ8IUZ5 450 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 LRRC8AQ8IWT6 810 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 GALNT6Q8NCL4 622 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 KLHL6Q8WZ60 621 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 OR6C1Q96RD1 312 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 BAG1Q99933 345 aaPredicted RBP11.5□□□□□ -0.57
HERC3-207ENST00000452979 NHEJ1Q9H9Q4 299 aaPredicted RBP11.5□□□□□ -0.57
HERC3-207ENST00000452979 SPTLC3Q9NUV7 552 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 HAUS2Q9NVX0 235 aa11.5□□□□□ -0.57
HERC3-207ENST00000452979 ZNHIT6Q9NWK9 470 aaKnown RBP11.5□□□□□ -0.57
HERC3-207ENST00000452979 PKD2L2Q9NZM6 624 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms