RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 SLC26A2P50443 739 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 VPS26BQ4G0F5 336 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 EARS2Q5JPH6 523 aaKnown RBP12.47□□□□□ -0.41
HDLBP-214ENST00000427183 TCEAL6Q6IPX3 200 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 FAM83AQ86UY5 434 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 HM13Q8TCT9 377 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 ZNF446Q9NWS9 450 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 COMMD3Q9UBI1 195 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 HES2Q9Y543 173 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 SIGLEC16A6NMB1 481 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 SLC33A1O00400 549 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-214ENST00000427183 EPHB6O15197 1021 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 SCNN1GP51170 649 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 VLDLRP98155 873 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 LIPEQ05469 1076 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 FAM35AQ86V20 835 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 RASSF5Q8WWW0 418 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 ERMAPQ96PL5 475 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-214ENST00000427183 TBX5Q99593 518 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 ZYG11BQ9C0D3 744 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 OR51V1Q9H2C8 321 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 DNMT3LQ9UJW3 386 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 FKBP7Q9Y680 259 aa12.47□□□□□ -0.41
HDLBP-214ENST00000427183 hCG_2039718K7EN88 272 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 HDCP19113 662 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 ALAS2P22557 587 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 CXCR3P49682 368 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 PPP3R1P63098 170 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 SMARCB1Q12824 385 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 CCNYL2Q5T2Q4 361 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 CWF19L1Q69YN2 538 aaKnown RBP12.46□□□□□ -0.41
HDLBP-214ENST00000427183 RASGEF1AQ8N9B8 481 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 FAM110BQ8TC76 370 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 EXOSC8Q96B26 276 aaKnown RBP12.46□□□□□ -0.41
HDLBP-214ENST00000427183 COQ8BQ96D53 544 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 CRELD1Q96HD1 420 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 RNF157Q96PX1 679 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 ADAM2Q99965 735 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 TREM1Q9NP99 234 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 ZNF142P52746 1687 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-214ENST00000427183 PGLSO95336 258 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 EFNA1P20827 205 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-214ENST00000427183 RAB27AP51159 221 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 AP3S2P59780 193 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 ECT2LQ008S8 904 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 ZNF155Q12901 538 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-214ENST00000427183 MTA1Q13330 715 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 SF1Q15637 639 aaKnown RBP12.46□□□□□ -0.41
HDLBP-214ENST00000427183 ZNF570Q96NI8 536 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 SPON1Q9HCB6 807 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 MED31Q9Y3C7 131 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 ABCC6O95255 1503 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 GATBO75879 557 aaKnown RBP12.46□□□□□ -0.41
HDLBP-214ENST00000427183 CLPXO76031 633 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 POLR2JP52435 117 aaKnown RBP12.46□□□□□ -0.41
HDLBP-214ENST00000427183 YTHDF3Q7Z739 585 aaKnown RBP12.46□□□□□ -0.41
HDLBP-214ENST00000427183 OR2L8Q8NGY9 312 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 EBNA1BP2Q99848 306 aaKnown RBP12.46□□□□□ -0.41
HDLBP-214ENST00000427183 ASB7Q9H672 318 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 TMEM27Q9HBJ8 222 aa12.46□□□□□ -0.41
HDLBP-214ENST00000427183 DPPA5A6NC42 116 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 UROSP10746 265 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 VWA5B1Q5TIE3 1220 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 CHSY3Q70JA7 882 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 P2RY8Q86VZ1 359 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 NKX2-3Q8TAU0 364 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 RBM4BQ9BQ04 359 aaKnown RBP12.46□□□□□ -0.42
HDLBP-214ENST00000427183 RBM4Q9BWF3 364 aaKnown RBP12.46□□□□□ -0.42
HDLBP-214ENST00000427183 TESMINQ9Y4I5 508 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.46□□□□□ -0.42
HDLBP-214ENST00000427183 TRAV19A0A0A6YYK7 116 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 FABP12A6NFH5 140 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 ANXA2P2A6NMY6 339 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 RIIAD1A6NNX1 92 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 PLK4O00444 970 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 CLDN5O00501 218 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 GSC2O15499 205 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 SEPT4O43236 478 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 ANXA2P07355 339 aaKnown RBP12.46□□□□□ -0.42
HDLBP-214ENST00000427183 LAMP2P13473 410 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 LPOP22079 712 aaPredicted RBP12.46□□□□□ -0.42
HDLBP-214ENST00000427183 CCNHP51946 323 aaPredicted RBP12.46□□□□□ -0.42
HDLBP-214ENST00000427183 BEX3Q00994 111 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 C2orf80Q0P641 193 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 CERCAMQ5T4B2 595 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 PRAMEF17Q5VTA0 474 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 USP30Q70CQ3 517 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 LRRC70Q7Z2Q7 622 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 HJURPQ8NCD3 748 aaPredicted RBP12.46□□□□□ -0.42
HDLBP-214ENST00000427183 OR10H4Q8NGA5 316 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 LPGAT1Q92604 370 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 TIMMDC1Q9NPL8 285 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 PCDHB9Q9Y5E1 797 aa12.46□□□□□ -0.42
HDLBP-214ENST00000427183 SPATA31A6Q5VVP1 1343 aa12.45□□□□□ -0.42
HDLBP-214ENST00000427183 LOC100509620A0A075B734 347 aa12.45□□□□□ -0.42
HDLBP-214ENST00000427183 GNB5O14775 395 aa12.45□□□□□ -0.42
HDLBP-214ENST00000427183 TBX1O43435 398 aa12.45□□□□□ -0.42
HDLBP-214ENST00000427183 TSPAN1O60635 241 aa12.45□□□□□ -0.42
HDLBP-214ENST00000427183 GCATO75600 419 aa12.45□□□□□ -0.42
HDLBP-214ENST00000427183 INMTO95050 263 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms