RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ANKRD20A4Q4UJ75 823 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 CGB2Q6NT52 195 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 RETSATQ6NUM9 610 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 SPATA22Q8NHS9 363 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 MGME1Q9BQP7 344 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 PREBQ9HCU5 417 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 NT5MQ9NPB1 228 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 DOCK9Q9BZ29 2069 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 MT-CO1P00395 513 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 SRCP12931 536 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 HNF1BP35680 557 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 CLDN6P56747 220 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 IFT88Q13099 833 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 BMPR2Q13873 1038 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 SETMARQ53H47 684 aaPredicted RBP17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 SOWAHCQ53LP3 525 aaPredicted RBP17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 RALGPS1Q5JS13 557 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 CERCAMQ5T4B2 595 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 PIP5KL1Q5T9C9 394 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 ANKS4BQ8N8V4 417 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 ACMSDQ8TDX5 336 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 TADA1Q96BN2 335 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 ZNF669Q96BR6 464 aaPredicted RBP17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 TBL1YQ9BQ87 522 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 KIFC1Q9BW19 673 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 CINPQ9BW66 212 aaPredicted RBP17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 UBP1Q9NZI7 540 aa17.4■□□□□ 0.38
TNFSF13-205ENST00000396545 ASXL3Q9C0F0 2248 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 GCN1Q92616 2671 aaKnown RBP17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 PRAMEF26H0Y7S4 382 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 COPEO14579 308 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 KALRNO60229 2985 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 MAGEC1O60732 1142 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 KIAA0754O94854 1291 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 EPOP01588 193 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 CTSLP07711 333 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 JUPP14923 745 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 ITKQ08881 620 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 ZKSCAN8Q15776 578 aaPredicted RBP17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 SEPT7Q16181 437 aaKnown RBP17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 DENND5AQ6IQ26 1287 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 FBXL19Q6PCT2 694 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 SPATA21Q7Z572 469 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 TMEM145Q8NBT3 493 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 OR2A12Q8NGT7 310 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 LRRC8CQ8TDW0 803 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 PTCD2Q8WV60 388 aaKnown RBP17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 NXPE2Q96DL1 559 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 APOL2Q9BQE5 337 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 FSD1LQ9BXM9 530 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 ARNT2Q9HBZ2 717 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 VPS51Q9UID3 782 aa17.39■□□□□ 0.37
TNFSF13-205ENST00000396545 BNIP3LO60238 219 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 SNAP91O60641 907 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 EDF1O60869 148 aaKnown RBP17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 ZMPSTE24O75844 475 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 MT-CYBP00156 380 aaPredicted RBP17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 GP5P40197 560 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 NSUN2Q08J23 767 aaKnown RBP eCLIP17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 ILKQ13418 452 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 HES3Q5TGS1 186 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 CES3Q6UWW8 571 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 RANBP10Q6VN20 620 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 CDHR3Q6ZTQ4 885 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 ZNF75CPQ92670 426 aaPredicted RBP17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 LRIG1Q96JA1 1093 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 SRPK1Q96SB4 655 aaKnown RBP17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 CPNE1Q99829 537 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 PITPNM3Q9BZ71 974 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 SLC17A6Q9P2U8 582 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 CA5BQ9Y2D0 317 aa17.38■□□□□ 0.37
TNFSF13-205ENST00000396545 K7ERQ8 282 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 RNGTTO60942 597 aaKnown RBP17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 ERVK-10P10266 1014 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 GRTP1Q5TC63 336 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 MROH9Q5TGP6 573 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 NEK5Q6P3R8 708 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 KDELC1Q6UW63 502 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 TMIEQ8NEW7 156 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 ARRDC2Q8TBH0 407 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 CCT6BQ92526 530 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 SPOCK2Q92563 424 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 ISL2Q96A47 359 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 MRGPRX2Q96LB1 330 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 FICDQ9BVA6 458 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 C12orf65Q9H3J6 166 aaKnown RBP17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 MRM3Q9HC36 420 aaKnown RBP17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 ZFATQ9P243 1243 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 PLLPQ9Y342 182 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 PSAT1Q9Y617 370 aa17.37■□□□□ 0.37
TNFSF13-205ENST00000396545 SMAD6O43541 496 aaKnown RBP17.36■□□□□ 0.37
TNFSF13-205ENST00000396545 SDC3O75056 442 aa17.36■□□□□ 0.37
TNFSF13-205ENST00000396545 CKMT2P17540 419 aa17.36■□□□□ 0.37
TNFSF13-205ENST00000396545 CRHR1P34998 444 aa17.36■□□□□ 0.37
TNFSF13-205ENST00000396545 WNT3AP56704 352 aa17.36■□□□□ 0.37
TNFSF13-205ENST00000396545 ARF5P84085 180 aa17.36■□□□□ 0.37
TNFSF13-205ENST00000396545 TARDBPQ13148 414 aaKnown RBP eCLIP17.36■□□□□ 0.37
TNFSF13-205ENST00000396545 PROX2Q3B8N5 592 aa17.36■□□□□ 0.37
TNFSF13-205ENST00000396545 LACTB2Q53H82 288 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms