RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SPRED1Q7Z699 444 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 FAM124AQ86V42 546 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 PLCZ1Q86YW0 608 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 SLC7A6Q92536 515 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 SLC47A1Q96FL8 570 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 MUS81Q96NY9 551 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 APBA2Q99767 749 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 C9orf16Q9BUW7 83 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 HDHD5Q9BXW7 423 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 ERAP1Q9NZ08 941 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 RNF181Q9P0P0 153 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.44□□□□□ -1.22
CDKL5-201ENST00000379989 MAPRE3Q9UPY8 281 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 Q9Y3F1 56 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 ADGRA2Q96PE1 1338 aa7.44□□□□□ -1.22
CDKL5-201ENST00000379989 MICAL3Q7RTP6 2002 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 RRN3P2A6NIE6 340 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SGK1O00141 431 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TRIM24O15164 1050 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 OGTO15294 1046 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 CNMDO75829 334 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 APOA1P02647 267 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TRAPPC2P0DI81 140 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TRAPPC2BP0DI82 140 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 CYP11B1P15538 503 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ALOX12P18054 663 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 IL12RB1P42701 662 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 NCS1P62166 190 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 BTN1A1Q13410 526 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SKIV2LQ15477 1246 aaKnown RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 Q3ZCU0 254 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ZBTB37Q5TC79 503 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 IRAK1BP1Q5VVH5 260 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 RAP1GAP2Q684P5 730 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TYW3Q6IPR3 259 aaKnown RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ACAD10Q6JQN1 1059 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ALKBH2Q6NS38 261 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF517Q6ZMY9 492 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 CREB3L2Q70SY1 520 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PCGF5Q86SE9 256 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PDIK1LQ8N165 341 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PCDH20Q8N6Y1 951 aaKnown RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 GPRC5AQ8NFJ5 357 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SLC22A17Q8WUG5 538 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 LPPQ93052 612 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 LRRC39Q96DD0 335 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 NEDD4LQ96PU5 975 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TSEN34Q9BSV6 310 aaKnown RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 AGPAT4Q9NRZ5 378 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 KLHL11Q9NVR0 708 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SNX6Q9UNH7 406 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 DRG1Q9Y295 367 aaKnown RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PRELID3BQ9Y3B1 194 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 GRIP1Q9Y3R0 1128 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 HSPE1-MOB4S4R3N1 261 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SOWAHBA6NEL2 793 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PRORSD1PA6NEY8 169 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TCAF2A6NFQ2 919 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SSX5O60225 188 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TADA2AO75478 443 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ADRB2P07550 413 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ERP29P30040 261 aaKnown RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TGFBR1P36897 503 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SNX16P57768 344 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PSME3P61289 254 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SEMA3AQ14563 771 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 BCL7AQ4VC05 210 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 LRRC38Q5VT99 294 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PRSS48Q7RTY5 328 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SLC47A2Q86VL8 602 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 C10orf107Q8IVU9 208 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 SYTL1Q8IYJ3 562 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 KATNAL2Q8IYT4 538 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF781Q8N8C0 355 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 MCFD2Q8NI22 146 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 KAT5Q92993 513 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PPP1R2P1Q96PQ5 205 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF300Q96RE9 604 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 BCL7BQ9BQE9 202 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 CBWD1Q9BRT8 395 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TTPALQ9BTX7 342 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 BCL2L14Q9BZR8 327 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ABCG4Q9H172 646 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ASB7Q9H672 318 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 WDR55Q9H6Y2 383 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 OPTCQ9UBM4 332 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 RPH3AQ9Y2J0 694 aaPredicted RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ACTL7AQ9Y615 435 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 CSNK1G3Q9Y6M4 447 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 UTRNP46939 3433 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 OR6C70A6NIJ9 312 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ACKR2O00590 384 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 ARHGEF9O43307 516 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 C4BPAP04003 597 aaKnown RBP7.43□□□□□ -1.22
CDKL5-201ENST00000379989 IL7RP16871 459 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 MSH3P20585 1137 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 PCMT1P22061 227 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 TPMTP51580 245 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 GDF10P55107 478 aa7.43□□□□□ -1.22
CDKL5-201ENST00000379989 BNC1Q01954 994 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms