RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 PAAF1Q9BRP4 392 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 GMPR2Q9P2T1 348 aaKnown RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 CACNG4Q9UBN1 327 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 ATP11BQ9Y2G3 1177 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 AAR2Q9Y312 384 aaKnown RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 SNX5Q9Y5X3 404 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 M0QZQ0 153 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 VPS4BO75351 444 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 GMNNO75496 209 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 PRSS23O95084 383 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 THRBP10828 461 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 ODC1P11926 461 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 IGFBP6P24592 240 aaPredicted RBP18.91■□□□□ 0.62
CMTM3-201ENST00000361909 YWHAQP27348 245 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 ELK4P28324 431 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 SLC26A3P40879 764 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 GSK3BP49841 420 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 DSC1Q08554 894 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 GRIK2Q13002 908 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 ZNF460Q14592 562 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 SLC14A2Q15849 920 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 TIGD5Q53EQ6 642 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 CLLU1OSQ5K130 101 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 DEFB106AQ8N104 65 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 DNAJC5GQ8N7S2 189 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 BPIFB1Q8TDL5 484 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 ARMC5Q96C12 935 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 TXNDC15Q96J42 360 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 TEKT5Q96M29 485 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 SLC30A3Q99726 388 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 NECTIN3Q9NQS3 549 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 BAG5Q9UL15 447 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 ISPDA4D126 451 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 HCRTO43612 131 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 GABARAPO95166 117 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 CXCL10P02778 98 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 LCP1P13796 627 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 CAPN3P20807 821 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 MAPK10P53779 464 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 SCAPQ12770 1279 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 AQP6Q13520 282 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 DGUOKQ16854 277 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 PERM1Q5SV97 790 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 CD300LGQ6UXG3 332 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 CYHR1Q6ZMK1 362 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 MFSD6LQ8IWD5 586 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 MFSD4AQ8N468 514 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 PDZD8Q8NEN9 1154 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 ATP13A3Q9H7F0 1226 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 SDR39U1Q9NRG7 319 aaPredicted RBP18.91■□□□□ 0.62
CMTM3-201ENST00000361909 DNMT3BQ9UBC3 853 aaKnown RBP18.91■□□□□ 0.62
CMTM3-201ENST00000361909 CDH9Q9ULB4 789 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 PCDHGA11Q9Y5H2 935 aa18.91■□□□□ 0.62
CMTM3-201ENST00000361909 NEMP2A6NFY4 417 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 RGS13O14921 159 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 LSM1O15116 133 aaKnown RBP18.9■□□□□ 0.62
CMTM3-201ENST00000361909 CACNG3O60359 315 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 KATNA1O75449 491 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 FGF4P08620 206 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 CDH1P12830 882 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 ERCC2P18074 760 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 HTR1EP28566 365 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 CLCN5P51795 746 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 BTBD8Q5XKL5 378 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 KIAA0930Q6ICG6 404 aaPredicted RBP18.9■□□□□ 0.62
CMTM3-201ENST00000361909 R3HCC1LQ7Z5L2 792 aaKnown RBP18.9■□□□□ 0.62
CMTM3-201ENST00000361909 SLC2A14Q8TDB8 520 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 NPY6RQ99463 290 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 TNFRSF12AQ9NP84 129 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 TMEM45AQ9NWC5 275 aa18.9■□□□□ 0.62
CMTM3-201ENST00000361909 TMEM189-UBE2V1I3L0A0 370 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 MYO1DO94832 1006 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 ALPLP05186 524 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 PCSK1P29120 753 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 SERPINB1P30740 379 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 OTUD1Q5VV17 481 aaPredicted RBP18.89■□□□□ 0.62
CMTM3-201ENST00000361909 BLOC1S3Q6QNY0 202 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 SLCO6A1Q86UG4 719 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 METTL23Q86XA0 190 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 ZCCHC7Q8N3Z6 543 aaKnown RBP18.89■□□□□ 0.62
CMTM3-201ENST00000361909 PHF10Q8WUB8 498 aaKnown RBP18.89■□□□□ 0.62
CMTM3-201ENST00000361909 SUSD3Q96L08 255 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 AKTIPQ9H8T0 292 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 CYP4F12Q9HCS2 524 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 PDE10AQ9Y233 779 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 PCDHB7Q9Y5E2 793 aa18.89■□□□□ 0.62
CMTM3-201ENST00000361909 TSC2P49815 1807 aa18.89■□□□□ 0.61
CMTM3-201ENST00000361909 ZFC3H1O60293 1989 aaKnown RBP18.89■□□□□ 0.61
CMTM3-201ENST00000361909 H0Y858 1186 aa18.89■□□□□ 0.61
CMTM3-201ENST00000361909 SUPT7LO94864 414 aa18.89■□□□□ 0.61
CMTM3-201ENST00000361909 NPPAP01160 153 aa18.89■□□□□ 0.61
CMTM3-201ENST00000361909 TPH1P17752 444 aa18.89■□□□□ 0.61
CMTM3-201ENST00000361909 SHMT2P34897 504 aa18.89■□□□□ 0.61
CMTM3-201ENST00000361909 SLC1A2P43004 574 aa18.89■□□□□ 0.61
CMTM3-201ENST00000361909 ATN1P54259 1190 aaPredicted RBP18.89■□□□□ 0.61
CMTM3-201ENST00000361909 TPI1P60174 286 aa18.89■□□□□ 0.61
CMTM3-201ENST00000361909 SEMA3BQ13214 749 aa18.89■□□□□ 0.61
CMTM3-201ENST00000361909 SELENBP1Q13228 472 aa18.89■□□□□ 0.61
CMTM3-201ENST00000361909 CSHL1Q14406 222 aa18.89■□□□□ 0.61
CMTM3-201ENST00000361909 CTF1Q16619 201 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms