RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 METTL3Q86U44 580 aaKnown RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 SERPINA9Q86WD7 417 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 ENDOVQ8N8Q3 282 aaKnown RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 NELL1Q92832 810 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 MFSD1Q9H3U5 465 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 RAD21L1Q9H4I0 556 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 AKTIPQ9H8T0 292 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 GKN1Q9NS71 199 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 ZBTB11O95625 1053 aaPredicted RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 ESR1P03372 595 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 CCNFP41002 786 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 MTHFRP42898 656 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 USP46P62068 366 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 TOP3AQ13472 1001 aaPredicted RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 FNDC3BQ53EP0 1204 aaKnown RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 ATXN7L2Q5T6C5 722 aaPredicted RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 TYW3Q6IPR3 259 aaKnown RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 CASP12Q6UXS9 341 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 ZC3H7AQ8IWR0 971 aaKnown RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 CEP44Q9C0F1 390 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 TMEM245Q9H330 911 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 SMOC2Q9H3U7 446 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 ATAD3AQ9NVI7 634 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 KIAA1522Q9P206 1035 aaPredicted RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 CDV3Q9UKY7 258 aaKnown RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 AHDC1Q5TGY3 1603 aaPredicted RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 ANKDD1BA6NHY2 528 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 ZNF37AP17032 561 aaPredicted RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 AQP1P29972 269 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 RPIAP49247 311 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 PURAQ00577 322 aaKnown RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 HERC3Q15034 1050 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 CWF19L1Q69YN2 538 aaKnown RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 TMEM214Q6NUQ4 689 aaKnown RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 CROCCP3Q8IVE0 287 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 SLC47A1Q96FL8 570 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 ZBED3Q96IU2 234 aaPredicted RBP16.21■□□□□ 0.19
SCAF1-201ENST00000360565 ZFYVE19Q96K21 471 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 ZNF778Q96MU6 729 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 KCTD5Q9NXV2 234 aa16.21■□□□□ 0.19
SCAF1-201ENST00000360565 KPNA4O00629 521 aaPredicted RBP16.21■□□□□ 0.18
SCAF1-201ENST00000360565 FTH1P02794 183 aa16.21■□□□□ 0.18
SCAF1-201ENST00000360565 ASRGL1Q7L266 308 aa16.21■□□□□ 0.18
SCAF1-201ENST00000360565 PROX1Q92786 737 aa16.21■□□□□ 0.18
SCAF1-201ENST00000360565 NUDT4Q9NZJ9 180 aa16.21■□□□□ 0.18
SCAF1-201ENST00000360565 CNTN5O94779 1100 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 PTGER3P43115 390 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 KIR3DL1P43629 444 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 NOGQ13253 232 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 PLEKHG4Q58EX7 1191 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 HIPK3Q9H422 1215 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 CCSER2Q9H7U1 834 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 HNF4AP41235 474 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 KCNQ1P51787 676 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 GTF2H2Q13888 395 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 GTF2H2CQ6P1K8 395 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 IFNLR1Q8IU57 520 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-201ENST00000360565 ZBTB2Q8N680 514 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 PNPT1Q8TCS8 783 aaKnown RBP16.2■□□□□ 0.18
SCAF1-201ENST00000360565 BBS4Q96RK4 519 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 ADI1Q9BV57 179 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 ACAT2Q9BWD1 397 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 TFB2MQ9H5Q4 396 aaKnown RBP16.2■□□□□ 0.18
SCAF1-201ENST00000360565 ARMC7Q9H6L4 198 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 PLGRKTQ9HBL7 147 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 ETAA1Q9NY74 926 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 ELOVL7A1L3X0 281 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 XYLBO75191 536 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 MED26O95402 600 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 PRKAG1P54619 331 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 SEMG2Q02383 582 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 PRKCZQ05513 592 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 TRAF3Q13114 568 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 SIM2Q14190 667 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-201ENST00000360565 NAT16Q8N8M0 369 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 ARL14EPQ8N8R7 260 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-201ENST00000360565 ZNF557Q8N988 423 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-201ENST00000360565 FBXO22Q8NEZ5 403 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 OR10A6Q8NH74 314 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 ASB9Q96DX5 294 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 RPL10LQ96L21 214 aaKnown RBP16.2■□□□□ 0.18
SCAF1-201ENST00000360565 YIPF2Q9BWQ6 316 aa16.2■□□□□ 0.18
SCAF1-201ENST00000360565 INTS10Q9NVR2 710 aaKnown RBP16.2■□□□□ 0.18
SCAF1-201ENST00000360565 SLC38A8A6NNN8 435 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 SLC7A1P30825 629 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 SPAM1P38567 509 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 TAF1AQ15573 450 aaPredicted RBP16.19■□□□□ 0.18
SCAF1-201ENST00000360565 PHKG1Q16816 387 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 RFX4Q33E94 735 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 PERM1Q5SV97 790 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 C14orf80Q86SX3 495 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 ANKRD46Q86W74 232 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 CLP1Q92989 425 aaKnown RBP16.19■□□□□ 0.18
SCAF1-201ENST00000360565 ADAMTS10Q9H324 1103 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 ZBTB26Q9HCK0 441 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 POLR3BQ9NW08 1133 aaPredicted RBP16.19■□□□□ 0.18
SCAF1-201ENST00000360565 GALPQ9UBC7 116 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 MYH4Q9Y623 1939 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 DCLK1O15075 740 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 OAS1P00973 400 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms