RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PPP2R2BQ00005 443 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 MAPK14Q16539 360 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 OR52K2Q8NGK3 314 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 SLC35C1Q96A29 364 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 AGXT2Q9BYV1 514 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 SGK2Q9HBY8 427 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 BEX3Q00994 111 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 SLC26A9Q7LBE3 791 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 TLR10Q9BXR5 811 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 GSDMCQ9BYG8 508 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 ABCB10Q9NRK6 738 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 B4GALT4O60513 344 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 USP4Q13107 963 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 PARGQ86W56 976 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 LEMD2Q8NC56 503 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 SLC4A9Q96Q91 983 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 DCLK1O15075 740 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 IFNW1P05000 195 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 RPIAP49247 311 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 AKIRIN2Q53H80 203 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 MED28Q9H204 178 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 PNPLA8Q9NP80 782 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 SNX15Q9NRS6 342 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 IMP3Q9NV31 184 aaKnown RBP9.62□□□□□ -0.87
CUX1-203ENST00000360264 PSMD11O00231 422 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 FABP3P05413 133 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 NKIRAS2Q9NYR9 191 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 CFL2Q9Y281 166 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 GPR142Q7Z601 462 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 LACRTQ9GZZ8 138 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 STK16O75716 305 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 PIM1P11309 404 aaPredicted RBP9.62□□□□□ -0.87
CUX1-203ENST00000360264 KHKP50053 298 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 RHBDF2Q6PJF5 856 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 FIP1L1Q6UN15 594 aaKnown RBP9.62□□□□□ -0.87
CUX1-203ENST00000360264 MPP5Q8N3R9 675 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 SLC38A3Q99624 504 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 DNAJC11Q9NVH1 559 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 CASKO14936 926 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 NRP2O60462 931 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 SCN1BQ07699 218 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 ATP1A4Q13733 1029 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 SLC9B1Q4ZJI4 515 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 ANKFN1Q8N957 763 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 KCTD13Q8WZ19 329 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 SERINC1Q9NRX5 453 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 PCDHGC3Q9UN70 934 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 CCNB2O95067 398 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 CDK18Q07002 472 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 PPP3CAQ08209 521 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 RAB43Q86YS6 212 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 CNTD1Q8N815 330 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 HERVK_113Q902F9 699 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 PLEKHG4BQ96PX9 1271 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 PSKH2Q96QS6 385 aa9.62□□□□□ -0.87
CUX1-203ENST00000360264 PREX1Q8TCU6 1659 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 EML1O00423 815 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 PITPNM1O00562 1244 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 TNFRSF21O75509 655 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 DLG4P78352 724 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 PDK4Q16654 411 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 UBE2R2Q712K3 238 aaPredicted RBP9.61□□□□□ -0.87
CUX1-203ENST00000360264 FCGR1BQ92637 280 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 DNAJC28Q9NX36 388 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 TNS2Q63HR2 1409 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 SSR2P43308 183 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 PLET1Q6UQ28 207 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 DENND1AQ8TEH3 1009 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 RNF157Q96PX1 679 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 CDH7Q9ULB5 785 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 PIK3C2BO00750 1634 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 CD44P16070 742 aaKnown RBP9.61□□□□□ -0.87
CUX1-203ENST00000360264 EIF2S3P41091 472 aaKnown RBP9.61□□□□□ -0.87
CUX1-203ENST00000360264 SLC1A5Q15758 541 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 C1orf186Q6ZWK4 172 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 CAPSLQ8WWF8 208 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 SHDQ96IW2 340 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 EFR3BQ9Y2G0 817 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 H0YGN5 161 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 ABHD13Q7L211 337 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 ROPN1LQ96C74 230 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 ZBTB10Q96DT7 871 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 SCGB3A2Q96PL1 93 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 MCCC2Q9HCC0 563 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 SLC30A4O14863 429 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 CLDN9O95484 217 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 CD2P06729 351 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 KIR3DL1P43629 444 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 SOX10P56693 466 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 SELENOVP59797 346 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 CYP4F2P78329 520 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 CYP4F3Q08477 520 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 RIPPLY1Q0D2K3 151 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.61□□□□□ -0.871e-6■■■■■ 31.5
CUX1-203ENST00000360264 PRR23BQ6ZRT6 265 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 ZNF347Q96SE7 839 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 NDNQ99608 321 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 TNKS2Q9H2K2 1166 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 PRDM12Q9H4Q4 367 aa9.61□□□□□ -0.87
CUX1-203ENST00000360264 TCRBV5S4A2TA0A5A2 114 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms