RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 GSTCDQ8NEC7 633 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 OR2L8Q8NGY9 312 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 BSNDQ8WZ55 320 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 C7orf26Q96N11 449 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 OR2M4Q96R27 311 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SECISBP2Q96T21 854 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 LGR4Q9BXB1 951 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 KDM6AO15550 1401 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 ZNF705GA8MUZ8 300 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 SLC9A3R1O14745 358 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 SLC16A4O15374 487 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SLC22A3O75751 556 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 OR2B3O76000 313 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SLC34A2O95436 690 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 IFNA21P01568 189 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 CCNYL3P0C7X3 344 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 EVI2BP34910 448 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 APLP1P51693 650 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 PRKCDQ05655 676 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SNTA1Q13424 505 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 CHRNA6Q15825 494 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SSX7Q7RTT5 188 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 GALNT5Q7Z7M9 940 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ZNF366Q8N895 744 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 FAM13CQ8NE31 585 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 BEST4Q8NFU0 473 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ROPN1LQ96C74 230 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 TBC1D13Q9NVG8 400 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ZMAT5Q9UDW3 170 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 PRKAG2Q9UGJ0 569 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 EIF2B4Q9UI10 523 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 ATP10AO60312 1499 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 FAM237BA0A1B0GVD1 139 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 IFNA1P01562 189 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 MTHFD1P11586 935 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 ADD2P35612 726 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 GRIA4P48058 902 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 VEGFCP49767 419 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 EAF2Q96CJ1 260 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 ZNF419Q96HQ0 510 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 NXF3Q9H4D5 531 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 IL1RAPQ9NPH3 570 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 INTS7Q9NVH2 962 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 PRR12Q9ULL5 1215 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 A0A1B0GUL6 1792 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 FRMPD4Q14CM0 1322 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 AGAP5A6NIR3 686 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SLITRK5O94991 958 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 CTBP2P56545 445 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 RASGEF1BQ0VAM2 473 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 MEA1Q16626 185 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 BAIAP2L2Q6UXY1 529 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 PIWIL4Q7Z3Z4 852 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 AMIGO1Q86WK6 493 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 CPNE2Q96FN4 548 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 PHOX2BQ99453 314 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 EIF2AK1Q9BQI3 630 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 ERVK-5Q9HDB9 667 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 GPR108Q9NPR9 543 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 GPRC5BQ9NZH0 403 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 PCDHA11Q9Y5I1 949 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 EP300Q09472 2414 aaPredicted RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 GRID2O43424 1007 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 NUDT14O95848 222 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ITGA4P13612 1032 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 CCNB1P14635 433 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 WEE1P30291 646 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 CSHL1Q14406 222 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 TEAD4Q15561 434 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 HMGN3Q15651 99 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 RC3H1Q5TC82 1133 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 FAM122CQ6P4D5 195 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ZNF730Q6ZMV8 503 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 PLEKHG7Q6ZR37 379 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 DDX53Q86TM3 631 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 TWNKQ96RR1 684 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 AP5M1Q9H0R1 490 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 THAP2Q9H0W7 228 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SCP2D1Q9UJQ7 156 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 MGAT4BQ9UQ53 548 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ZDHHC9Q9Y397 364 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 DUSP10Q9Y6W6 482 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 UBR1Q8IWV7 1749 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 IRS2Q9Y4H2 1338 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 BORCS7-ASMTA0A0B4J1R7 106 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 MDFIC2A0A1B0GVS7 189 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 WDR27A2RRH5 827 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 ISM1B1AKI9 464 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 SLC28A2O43868 658 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 CYBBP04839 570 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 RPL21P46778 160 aaKnown RBP6.13□□□□□ -1.43
VCAN-203ENST00000343200 POLD2P49005 469 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 RAB7AP51149 207 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 OXCT1P55809 520 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 CDH17Q12864 832 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 GALEQ14376 348 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 PUM1Q14671 1186 aaKnown RBP eCLIP6.13□□□□□ -1.43
VCAN-203ENST00000343200 TLR1Q15399 786 aa6.13□□□□□ -1.43
VCAN-203ENST00000343200 TMEM44Q2T9K0 475 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms