RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 GAL3ST3Q96A11 431 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 ULBP1Q9BZM6 244 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 DHX33Q9H6R0 707 aaKnown RBP5.53□□□□□ -1.52
CPSF2-201ENST00000298875 XPR1Q9UBH6 696 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 EME2A4GXA9 379 aaPredicted RBP5.53□□□□□ -1.52
CPSF2-201ENST00000298875 FPGTO14772 594 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 MID1O15344 667 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 DPEP1P16444 411 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 AXLP30530 894 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 CDKL1Q00532 357 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 USP4Q13107 963 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 CPSF6Q16630 551 aaKnown RBP eCLIP5.53□□□□□ -1.52
CPSF2-201ENST00000298875 SMU1Q2TAY7 513 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 C1orf189Q5VU69 101 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 SPOCK3Q9BQ16 436 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 SNRNP25Q9BV90 132 aaKnown RBP5.53□□□□□ -1.52
CPSF2-201ENST00000298875 TMEM168Q9H0V1 697 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 ASTN1O14525 1302 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 BBIP1A8MTZ0 92 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 SNX3O60493 162 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 CCNDBP1O95273 360 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 MARCKSL1P49006 195 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 PPP3CAQ08209 521 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 ATP13A4Q4VNC1 1196 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 CHRDL2Q6WN34 429 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 FSTL5Q8N475 847 aaPredicted RBP5.53□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF548Q8NEK5 533 aaPredicted RBP5.53□□□□□ -1.52
CPSF2-201ENST00000298875 NOS2P35228 1153 aa5.52□□□□□ -1.52
CPSF2-201ENST00000298875 SLC7A2P52569 658 aa5.52□□□□□ -1.52
CPSF2-201ENST00000298875 E2F2Q14209 437 aa5.52□□□□□ -1.52
CPSF2-201ENST00000298875 NCCRP1Q6ZVX7 275 aaPredicted RBP5.52□□□□□ -1.52
CPSF2-201ENST00000298875 LINGO2Q7L985 606 aa5.52□□□□□ -1.52
CPSF2-201ENST00000298875 OR4L1Q8NH43 312 aa5.52□□□□□ -1.52
CPSF2-201ENST00000298875 MRPL9Q9BYD2 267 aaKnown RBP5.52□□□□□ -1.52
CPSF2-201ENST00000298875 TMX2Q9Y320 296 aa5.52□□□□□ -1.52
CPSF2-201ENST00000298875 PHLPP1O60346 1717 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 UROSP10746 265 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 PRDX6P30041 224 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 PHC1P78364 1004 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 ELAVL2Q12926 359 aaKnown RBP5.52□□□□□ -1.53
CPSF2-201ENST00000298875 ITPK1Q13572 414 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 LACTB2Q53H82 288 aaPredicted RBP5.52□□□□□ -1.53
CPSF2-201ENST00000298875 CPTPQ5TA50 214 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 SPATA19Q7Z5L4 167 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 WNT8BQ93098 351 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 TUBA1CQ9BQE3 449 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 SPATC1LQ9H0A9 340 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 QSOX1O00391 747 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 TGDSO95455 350 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 LIPEQ05469 1076 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 PEX6Q13608 980 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 DGLUCYQ7Z3D6 616 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 TCF25Q9BQ70 676 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 AARSD1Q9BTE6 412 aaKnown RBP5.52□□□□□ -1.53
CPSF2-201ENST00000298875 PRRG4Q9BZD6 226 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 RIOX1Q9H6W3 641 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 FAM86C1Q9NVL1 165 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 SLC17A7Q9P2U7 560 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 GOLGA4Q13439 2230 aaKnown RBP5.52□□□□□ -1.53
CPSF2-201ENST00000298875 DDX3XO00571 662 aaKnown RBP eCLIP5.52□□□□□ -1.533e-12■■■■□ 21.2
CPSF2-201ENST00000298875 RB1P06400 928 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 DBIP07108 87 aaKnown RBP5.52□□□□□ -1.53
CPSF2-201ENST00000298875 NR2F6P10588 404 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 TFPIP10646 304 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 MC4RP32245 332 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 BNIP1Q12981 228 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 DLG2Q15700 870 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 EARS2Q5JPH6 523 aaKnown RBP5.52□□□□□ -1.53
CPSF2-201ENST00000298875 FAM91A1Q658Y4 838 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 IQSEC1Q6DN90 963 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 SLC25A25Q6KCM7 469 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 OTOP1Q7RTM1 612 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 PTF1AQ7RTS3 328 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 OR52J3Q8NH60 311 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 CLPTM1LQ96KA5 538 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 AP1S3Q96PC3 154 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 CORO1BQ9BR76 489 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 SLC22A4Q9H015 551 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 MAN2B2Q9Y2E5 1009 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 KCNIP3Q9Y2W7 256 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 UBR1Q8IWV7 1749 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 MAP2K7O14733 419 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 ZNF208O43345 1280 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 LGR5O75473 907 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 CABYRO75952 493 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 YES1P07947 543 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 DCKP27707 260 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 AP1S1P61966 158 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 PCDH1Q08174 1060 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 PYHIN1Q6K0P9 492 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 PQLC1Q8N2U9 271 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 CYP2W1Q8TAV3 490 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 CEP295NLQ96MC4 621 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 UROC1Q96N76 676 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 MAP4K5Q9Y4K4 846 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 COL14A1Q05707 1796 aaKnown RBP5.52□□□□□ -1.53
CPSF2-201ENST00000298875 FAM86C2PA6NEL3 165 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 CLDN25C9JDP6 229 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 AZIN1O14977 448 aa5.52□□□□□ -1.53
CPSF2-201ENST00000298875 SCN2BO60939 215 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms