RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 METTL6Q8TCB7 284 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 RAB2BQ8WUD1 216 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 KCTD4Q8WVF5 259 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 TADA1Q96BN2 335 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 RNF38Q9H0F5 515 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 SSU72Q9NP77 194 aaKnown RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 PNPLA8Q9NP80 782 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 ARHGEF4Q9NR80 690 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 SNX15Q9NRS6 342 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 A0A1W2PQ67 120 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 MT-ND1P03886 318 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 HAPLN1P10915 354 aaPredicted RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 ATP5F1P24539 256 aaPredicted RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 IL18R1Q13478 541 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 SETMARQ53H47 684 aaPredicted RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 CENPSQ8N2Z9 138 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 RTL3Q8N8U3 475 aaKnown RBP11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 OR8H1Q8NGG4 311 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 OR2T34Q8NGX1 318 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 OR2T3Q8NH03 318 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 BPIFB1Q8TDL5 484 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 OVCA2Q8WZ82 227 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 CLPBQ9H078 707 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 DPEP3Q9H4B8 488 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 CD207Q9UJ71 328 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 GNPTGQ9UJJ9 305 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 STYXL1Q9Y6J8 313 aa11.31□□□□□ -0.6
NPC1L1-201ENST00000289547 HAT1O14929 419 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 NOS1APO75052 506 aaPredicted RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 GSTM1P09488 218 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 CTSAP10619 480 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 ATP12AP54707 1039 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 CA9Q16790 459 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 SMU1Q2TAY7 513 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 ANKS1BQ7Z6G8 1248 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 GRASPQ7Z6J2 395 aaPredicted RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 SMG8Q8ND04 991 aaKnown RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 GRIN3AQ8TCU5 1115 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 SH3RF2Q8TEC5 729 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 NXNL1Q96CM4 212 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 FCRL2Q96LA5 508 aaPredicted RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 PANX3Q96QZ0 392 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 EBF4Q9BQW3 602 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 GUCY1B2O75343 617 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 KLHL18O94889 574 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 SERPINA1P01009 418 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 TSPAN19P0C672 248 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 ERCC2P18074 760 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 MYBPC3Q14896 1274 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 UPP1Q16831 310 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 ASTE1Q2TB18 679 aaPredicted RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 ZNF829Q3KNS6 432 aaPredicted RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 ZBED5Q49AG3 693 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 LIPMQ5VYY2 423 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 TUBA3EQ6PEY2 450 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 PHACTR4Q8IZ21 702 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 OR52K1Q8NGK4 314 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 FAM45AQ8TCE6 357 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 TOP1MTQ969P6 601 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 IKZF4Q9H2S9 585 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 PLK2Q9NYY3 685 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 RREB1Q92766 1687 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 PLOD3O60568 738 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 PAGE1O75459 146 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 STAU1O95793 577 aaKnown RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 TACR2P21452 398 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 RPS9P46781 194 aaKnown RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 TUBA1BP68363 451 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 ALDH6A1Q02252 535 aaKnown RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 TEAD4Q15561 434 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 C15orf59Q2T9L4 293 aaPredicted RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 TUBA1AQ71U36 451 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 ZNF280BQ86YH2 543 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 CRYBG2Q8N1P7 616 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 BANPQ8N9N5 519 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 LRRN4Q8WUT4 740 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 PAK6Q9NQU5 681 aaPredicted RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 ACSS2Q9NR19 701 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 ATP6V1HQ9UI12 483 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 FADS2O95864 444 aaKnown RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 PABPC4LP0CB38 370 aaKnown RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 CKMT2P17540 419 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 LMO2P25791 158 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 HALP42357 657 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 CDH4P55283 916 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 PUS10Q3MIT2 529 aaKnown RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 ATAD3BQ5T9A4 648 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 PDSS2Q86YH6 399 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 EPHX4Q8IUS5 362 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 FAM9CQ8IZT9 166 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 HM13Q8TCT9 377 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 CCNB1IP1Q9NPC3 277 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 XPR1Q9UBH6 696 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 LEF1Q9UJU2 399 aaPredicted RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 MRPL42Q9Y6G3 142 aaKnown RBP11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 MYH8P13535 1937 aa11.3□□□□□ -0.6
NPC1L1-201ENST00000289547 A0A1B0GVM2 712 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 TCAF2A6NFQ2 919 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 KCNU1A8MYU2 1149 aa11.29□□□□□ -0.6
NPC1L1-201ENST00000289547 H3BN98 237 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms