RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 PDZD8Q8NEN9 1154 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NXNL1Q96CM4 212 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 FCRL2Q96LA5 508 aaPredicted RBP15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TEKT5Q96M29 485 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 AGPAT4Q9NRZ5 378 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 KLQ9UEF7 1012 aa15.86■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NEMP2A6NFY4 417 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TNFRSF10AO00220 468 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NCAM2O15394 837 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 OXTRP30559 389 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 INAVAQ3KP66 663 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CTXN3Q4LDR2 81 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 KCTD11Q693B1 232 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SPRED2Q7Z698 418 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 OR13F1Q8NGS4 319 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 STON2Q8WXE9 905 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TOX2Q96NM4 488 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ZNF347Q96SE7 839 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 OSBPL2Q9H1P3 480 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CXXC1Q9P0U4 656 aaPredicted RBP15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ANKMY1Q9P2S6 941 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ANKRD6Q9Y2G4 727 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 IRAK2O43187 625 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 GPC4O75487 556 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CXCL10P02778 98 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 EEF1B2P24534 225 aaKnown RBP15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 FASP25445 335 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CCT8P50990 548 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CSE1LP55060 971 aaKnown RBP15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ATP6AP1Q15904 470 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 RNF19BQ6ZMZ0 732 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 C16orf59Q7L2K0 433 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NECAB2Q7Z6G3 386 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MMAAQ8IVH4 418 aaKnown RBP15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CLIP4Q8N3C7 705 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 IPMKQ8NFU5 416 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ABHD11Q8NFV4 315 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SH3YL1Q96HL8 342 aaPredicted RBP15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 GPR22Q99680 433 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MCMBPQ9BTE3 642 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 C9orf16Q9BUW7 83 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SLC39A8Q9C0K1 460 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TMEM9Q9P0T7 183 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 IFT80Q9P2H3 777 aaPredicted RBP15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CARD8Q9Y2G2 431 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 DGKBQ9Y6T7 804 aa15.85■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ACOX3O15254 700 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TBX18O95935 607 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NR4A2P43354 598 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 HNRNPFP52597 415 aaKnown RBP15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MPP1Q00013 466 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 GRSF1Q12849 480 aaKnown RBP eCLIP15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SLC12A1Q13621 1099 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CYP2U1Q7Z449 544 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ZC3HC1Q86WB0 502 aaKnown RBP15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 DHRSXQ8N5I4 330 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MAGEE2Q8TD90 523 aaPredicted RBP15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 FAR2Q96K12 515 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 RPL10LQ96L21 214 aaKnown RBP15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CSF3RQ99062 836 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MCOLN1Q9GZU1 580 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 POMKQ9H5K3 350 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PCDH12Q9NPG4 1184 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CASS4Q9NQ75 786 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 DSEQ9UL01 958 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CLDN25C9JDP6 229 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TNFRSF10BO14763 440 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CPB1P15086 417 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 IL10P22301 178 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ELK4P28324 431 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CAPGP40121 348 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ALDH7A1P49419 539 aaKnown RBP15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 POU6F1Q14863 301 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CYBRD1Q53TN4 286 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 FAM45BPQ6NSW5 357 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 FUT10Q6P4F1 479 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PIWIL3Q7Z3Z3 882 aaKnown RBP15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TFAP2DQ7Z6R9 452 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ARHGAP12Q8IWW6 846 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TXNDC5Q8NBS9 432 aaKnown RBP15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 FAM45AQ8TCE6 357 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SNX19Q92543 992 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 FEM1CQ96JP0 617 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SLC25A23Q9BV35 468 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 VN1R3Q9BXE9 311 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PKD2L2Q9NZM6 624 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NEU3Q9UQ49 428 aa15.84■□□□□ 0.13
MAP1LC3B-201ENST00000268607 VCANP13611 3396 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ATP6AP2A0A1C7CYW4 349 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ATP6AP2O75787 350 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 RASAL1O95294 804 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SNAP29O95721 258 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ENO2P09104 434 aaPredicted RBP15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 YWHAQP27348 245 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CSRP3P50461 194 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 RAD23AP54725 363 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TMBIM6P55061 237 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 C8orf82Q6P1X6 216 aaPredicted RBP15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ATPAF2Q8N5M1 289 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ATP6V0D2Q8N8Y2 350 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms