RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 ZNF268Q14587 947 aaPredicted RBP12.78□□□□□ -0.36
TTC39A-202ENST00000262676 DNMT3LQ9UJW3 386 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 ANKRD63C9JTQ0 380 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 CALCAP01258 141 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SAGP10523 405 aaPredicted RBP12.78□□□□□ -0.36
TTC39A-202ENST00000262676 HTR1BP28222 390 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SERPINA4P29622 427 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 COLEC12Q5KU26 742 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 OGFOD2Q6N063 350 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SLC30A6Q6NXT4 461 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 MOXD1Q6UVY6 613 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 PPTC7Q8NI37 304 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 IL22Q9GZX6 179 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 TREM1Q9NP99 234 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 PNPOQ9NVS9 261 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 TRBV23OR9-2A0A075B6M9 112 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 CSH1P0DML2 217 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 CSH2P0DML3 217 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 PGAM2P15259 253 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 IGFBP5P24593 272 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 ALDH4A1P30038 563 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 IGFALSP35858 605 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SLC12A3P55017 1021 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 MANFP55145 182 aaKnown RBP12.78□□□□□ -0.36
TTC39A-202ENST00000262676 CDH4P55283 916 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 AP3S2P59780 193 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 CPSF6Q16630 551 aaKnown RBP eCLIP12.78□□□□□ -0.36
TTC39A-202ENST00000262676 ASB12Q8WXK4 309 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 CD101Q93033 1021 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 TIMMDC1Q9NPL8 285 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 ZNF639Q9UID6 485 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SORCS3Q9UPU3 1222 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 PER2O15055 1255 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 ITGB1P05556 798 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 PSKH1P11801 424 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SLC7A2P52569 658 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SEMA5AQ13591 1074 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 RRP1BQ14684 758 aaKnown RBP12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SNX20Q7Z614 316 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 RALGPS2Q86X27 583 aaPredicted RBP12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SNX33Q8WV41 574 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 PPCDCQ96CD2 204 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 PGM2Q96G03 612 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 C5orf34Q96MH7 638 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 AIF1LQ9BQI0 150 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 GTPBP2Q9BX10 602 aaKnown RBP12.78□□□□□ -0.36
TTC39A-202ENST00000262676 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 MAU2Q9Y6X3 613 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 ISM1B1AKI9 464 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 XKRYO14609 159 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 TCEA1P23193 301 aaKnown RBP12.78□□□□□ -0.36
TTC39A-202ENST00000262676 GLRA2P23416 452 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 TNFSF9P41273 254 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 DLG4P78352 724 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SLC6A3Q01959 620 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 DPYSQ14117 519 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 TCEAL6Q6IPX3 200 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 BEND5Q7L4P6 421 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 ANKFN1Q8N957 763 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 ARHGAP9Q9BRR9 750 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
TTC39A-202ENST00000262676 UPB1Q9UBR1 384 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 FADS3Q9Y5Q0 445 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 ARHGAP23Q9P227 1491 aa12.78□□□□□ -0.36
TTC39A-202ENST00000262676 C2orf71A6NGG8 1288 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 C1QTNF3-AMACRE9PGA6 284 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 F8VP50 259 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 CSN2P05814 226 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 HOXC6P09630 235 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 BST1Q10588 318 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 DNASE1L3Q13609 305 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 GFOD2Q3B7J2 385 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 ANXA8L1Q5VT79 327 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 RTL4Q6ZR62 310 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 SATL1Q86VE3 508 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 RELTQ969Z4 430 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 CRELD1Q96HD1 420 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 TSPAN18Q96SJ8 248 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 CIB1Q99828 191 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 CFAP97Q9P2B7 532 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 GMEB2Q9UKD1 530 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 ARL5CA6NH57 179 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 NARSO43776 548 aaKnown RBP12.77□□□□□ -0.36
TTC39A-202ENST00000262676 HCN1O60741 890 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 SCGB1D2O95969 90 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 RAB10P61026 200 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 SCN1BQ07699 218 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 AHSA2Q719I0 299 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 PCDHGB3Q9Y5G1 929 aa12.77□□□□□ -0.36
TTC39A-202ENST00000262676 SLC33A1O00400 549 aaPredicted RBP12.77□□□□□ -0.37
TTC39A-202ENST00000262676 CHADO15335 359 aa12.77□□□□□ -0.37
TTC39A-202ENST00000262676 AVILO75366 819 aa12.77□□□□□ -0.37
TTC39A-202ENST00000262676 APODP05090 189 aa12.77□□□□□ -0.37
TTC39A-202ENST00000262676 LHCGRP22888 699 aa12.77□□□□□ -0.37
TTC39A-202ENST00000262676 CASP9P55211 416 aa12.77□□□□□ -0.37
TTC39A-202ENST00000262676 ILF2Q12905 390 aaKnown RBP12.77□□□□□ -0.37
TTC39A-202ENST00000262676 KCTD19Q17RG1 926 aaPredicted RBP12.77□□□□□ -0.37
TTC39A-202ENST00000262676 LSM12Q3MHD2 195 aaKnown RBP12.77□□□□□ -0.37
TTC39A-202ENST00000262676 ZDHHC17Q8IUH5 632 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms