RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 GP5P40197 560 aa17.31■□□□□ 0.36
HOXC6-201ENST00000243108 WNT3AP56704 352 aa17.31■□□□□ 0.36
HOXC6-201ENST00000243108 BNIP3Q12983 259 aa17.31■□□□□ 0.36
HOXC6-201ENST00000243108 SUZ12Q15022 739 aaKnown RBP17.31■□□□□ 0.36
HOXC6-201ENST00000243108 SEPT7Q16181 437 aaKnown RBP17.31■□□□□ 0.36
HOXC6-201ENST00000243108 SETMARQ53H47 684 aaPredicted RBP17.31■□□□□ 0.36
HOXC6-201ENST00000243108 MROH9Q5TGP6 573 aa17.31■□□□□ 0.36
HOXC6-201ENST00000243108 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.31■□□□□ 0.36
HOXC6-201ENST00000243108 ACMSDQ8TDX5 336 aa17.31■□□□□ 0.36
HOXC6-201ENST00000243108 CABS1Q96KC9 395 aa17.31■□□□□ 0.36
HOXC6-201ENST00000243108 ZNF599Q96NL3 588 aa17.31■□□□□ 0.36
HOXC6-201ENST00000243108 SRPK1Q96SB4 655 aaKnown RBP17.31■□□□□ 0.36
HOXC6-201ENST00000243108 DYRK4Q9NR20 520 aa17.31■□□□□ 0.36
HOXC6-201ENST00000243108 FADS3Q9Y5Q0 445 aa17.31■□□□□ 0.36
HOXC6-201ENST00000243108 PRAMEF26H0Y7S4 382 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 PMPCBO75439 489 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 PCDH8O95206 1070 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 TRIM16O95361 564 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 MMP2P08253 660 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 NMBRP28336 390 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 ABL2P42684 1182 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 GRK6P43250 576 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 TEDDM1Q5T9Z0 273 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 GRTP1Q5TC63 336 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 TMCO4Q5TGY1 634 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 NEK5Q6P3R8 708 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 CDHR3Q6ZTQ4 885 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 KANSL1Q7Z3B3 1105 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 SRLQ86TD4 932 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 OR2AP1Q8NGE2 309 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 SKA1Q96BD8 255 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 GRAMD1AQ96CP6 724 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 FSD1LQ9BXM9 530 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 GGT7Q9UJ14 662 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 PLLPQ9Y342 182 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 MSRB2Q9Y3D2 182 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 LRRK1Q38SD2 2015 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 DSPP15924 2871 aaKnown RBP17.3■□□□□ 0.36
HOXC6-201ENST00000243108 DFNA5O60443 496 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 GSRP00390 522 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 UGT2B4P06133 528 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 PROS1P07225 676 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 ITGA2BP08514 1039 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 CRHR1P34998 444 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 NUDT1P36639 197 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 CLDN2P57739 230 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 LBRQ14739 615 aaKnown RBP17.3■□□□□ 0.36
HOXC6-201ENST00000243108 ZKSCAN8Q15776 578 aaPredicted RBP17.3■□□□□ 0.36
HOXC6-201ENST00000243108 MYLK3Q32MK0 819 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 CGB2Q6NT52 195 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 IQCHQ86VS3 1027 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 PGBD5Q8N414 524 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 RYBPQ8N488 228 aaPredicted RBP17.3■□□□□ 0.36
HOXC6-201ENST00000243108 ANKS4BQ8N8V4 417 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 ARRDC2Q8TBH0 407 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 LRRC8CQ8TDW0 803 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 ZNF75CPQ92670 426 aaPredicted RBP17.3■□□□□ 0.36
HOXC6-201ENST00000243108 ISL2Q96A47 359 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 PPP1R16AQ96I34 528 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 FAM111AQ96PZ2 611 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 MCMBPQ9BTE3 642 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 C12orf65Q9H3J6 166 aaKnown RBP17.3■□□□□ 0.36
HOXC6-201ENST00000243108 ERVMER34-1Q9H9K5 563 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 IL1RAPL1Q9NZN1 696 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 ITM2BQ9Y287 266 aa17.3■□□□□ 0.36
HOXC6-201ENST00000243108 RRP15Q9Y3B9 282 aaKnown RBP17.3■□□□□ 0.36
HOXC6-201ENST00000243108 ANKRD36A6QL64 1941 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 GOLGA8CPA6NN73 597 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 C16orf96A6NNT2 1141 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 INSIG1O15503 277 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 ALDOAP04075 364 aaKnown RBP17.29■□□□□ 0.36
HOXC6-201ENST00000243108 EPHA8P29322 1005 aaPredicted RBP17.29■□□□□ 0.36
HOXC6-201ENST00000243108 RXRGP48443 463 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 IFT88Q13099 833 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 IHHQ14623 411 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 CYTH1Q15438 398 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 PDPK2PQ6A1A2 396 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 ALG1LQ6GMV1 187 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 FBXL19Q6PCT2 694 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 GCNT7Q6ZNI0 430 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 KCNMB4Q86W47 210 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 ZNF354CQ86Y25 554 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 SPOCK2Q92563 424 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 RBBP8Q99708 897 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 CDC6Q99741 560 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 TXNDC16Q9P2K2 825 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 LHX3Q9UBR4 397 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 TCAF1Q9Y4C2 921 aa17.29■□□□□ 0.36
HOXC6-201ENST00000243108 GOLGA4Q13439 2230 aaKnown RBP17.28■□□□□ 0.36
HOXC6-201ENST00000243108 CHD6Q8TD26 2715 aa17.28■□□□□ 0.36
HOXC6-201ENST00000243108 RAD51BO15315 384 aa17.28■□□□□ 0.36
HOXC6-201ENST00000243108 EDF1O60869 148 aaKnown RBP17.28■□□□□ 0.36
HOXC6-201ENST00000243108 CD86P42081 329 aa17.28■□□□□ 0.36
HOXC6-201ENST00000243108 MAGEA12P43365 314 aa17.28■□□□□ 0.36
HOXC6-201ENST00000243108 CSE1LP55060 971 aaKnown RBP17.28■□□□□ 0.36
HOXC6-201ENST00000243108 MAXP61244 160 aa17.28■□□□□ 0.36
HOXC6-201ENST00000243108 SNRPD1P62314 119 aaKnown RBP17.28■□□□□ 0.36
HOXC6-201ENST00000243108 DSC2Q02487 901 aa17.28■□□□□ 0.36
HOXC6-201ENST00000243108 CCDC15Q0P6D6 951 aa17.28■□□□□ 0.36
HOXC6-201ENST00000243108 INO80DQ53TQ3 878 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms