RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 MtpnP62774 118 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Slc30a3P97441 388 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Inf2Q0GNC1 1273 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Krt80Q0VBK2 452 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Trim40Q3UWA4 246 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr325Q5NCD2 326 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Mocs1Q5RKZ7 636 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Adamts16Q69Z28 1222 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cfap97Q6ZPR1 541 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 D3Ertd751eQ8BGN2 192 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ppp4r4Q8C0Y0 875 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Nckap1lQ8K1X4 1134 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cant1Q8VCF1 403 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr801Q8VEU1 318 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cdkal1Q91WE6 578 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Dhrs1Q99L04 313 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Dhrs4Q99LB2 279 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tmbim6Q9D2C7 237 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pou5f2Q9DAC9 329 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr703Q9EPF5 319 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pidd1Q9ERV7 915 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 CtsrQ9JIA9 334 aa11.5□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cyp4a12bA2A974 508 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Supt3B0QZW4 406 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Znf518bB2RRE4 1077 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 OgdhlE9Q7L0 1029 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr743L7N1Y2 311 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Capn5O08688 640 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gp5O08742 567 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 PthlhP22858 175 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Drd4P51436 387 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pold1P52431 1105 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Uba1Q02053 1058 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Rsrp1Q3UC65 298 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Zmat1Q3V0C1 714 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Afg1lQ3V384 480 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tp53i13Q5F267 385 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Zfp78Q5U406 512 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Rundc3bQ6PDC0 408 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Tas2r106Q7M724 308 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Plekha6Q7TQG1 1173 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Teddm1aQ810U2 305 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Parp12Q8BZ20 711 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cacnb2Q8CC27 655 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cyp4a12aQ91WL5 508 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Rnf167Q91XF4 347 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pycr2Q922Q4 320 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gins4Q99LZ3 223 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Dlgap1Q9D415 992 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ppp1r2Q9DCL8 206 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Sh3glb1Q9JK48 365 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Trem1Q9JKE2 230 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Thsd7bQ6P4U0 1607 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 2610008E11RikG3X964 669 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Igf2bp1O88477 577 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 P01669 111 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Zfp14P10755 501 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pdcd5P56812 126 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Arl1P61211 181 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Kcnab3P97382 249 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Grin2cQ01098 1239 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 KrtdapQ3V2T4 102 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Srek1ip1Q4V9W2 153 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 MlipQ5FW52 269 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Abcb7Q61102 752 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 CcncQ62447 283 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 DazlQ64368 298 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Pdcd2lQ8C5N5 364 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Fem1cQ8CEF1 617 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Armcx6Q8K3A6 301 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Olfr1361Q8VFH0 317 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ca9Q8VHB5 437 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Basp1Q91XV3 226 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Mrps2Q924T2 291 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Mrpl45Q9D0Q7 306 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Fads3Q9JJE7 449 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Hs6st1Q9QYK5 411 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Adam23Q9R1V7 829 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Rfc2Q9WUK4 349 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Osbpl10S4R1M9 766 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Ighv11-1A0A075B5R6 117 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Slc6a21A0A1B0GSD2 748 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm31371A0A1D5RM70 265 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Phf11bB4XVQ1 276 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 9330159F19RikD3Z623 648 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Dthd1E9PZX1 795 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Slc9a3G3X939 829 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gm21738J3QP72 227 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cdh1P09803 884 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Spp1P10923 294 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Gdf5P43027 495 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 DckP43346 260 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Hcrtr1P58307 416 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Cpne9Q1RLL3 553 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Q3KNL4 93 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Suz12Q80U70 741 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Kirrel1Q80W68 789 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Fstl5Q8BFR2 847 aa11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 Mrps35Q8BJZ4 320 aaKnown RBP11.49□□□□□ -0.57
Col9a1-202ENSMUST00000088349 UnkQ8BL48 810 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms