RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Msx3P70354 204 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mtf2Q02395 593 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Runx2Q08775 607 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mtnr1aQ61184 353 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Sox17Q61473 419 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rab34Q64008 259 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tfdp2Q64163 446 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tcaf3Q6QR59 914 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc7a6osQ7TPE5 306 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Lrrc8dQ8BGR2 859 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zfp595Q8BIN6 625 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pcdh20Q8BIZ0 952 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 R3hcc1lQ8BJM3 775 aaKnown RBP9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ptk7Q8BKG3 1062 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 4933409G03RikQ8C5U0 320 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Bend5Q8C6D4 421 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Sulf1Q8K007 870 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Fnbp1lQ8K012 605 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zbtb20Q8K0L9 741 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Colec12Q8K4Q8 742 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tmem143Q8VD26 458 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Uhrf1Q8VDF2 782 aaKnown RBP9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Scpep1Q920A5 452 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Taldo1Q93092 337 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 4930553M12RikQ9CUH1 165 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 IqchQ9D2K4 1071 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ankrd7Q9D504 279 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mrpl2Q9D773 306 aaKnown RBP9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rsph9Q9D9V4 276 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr271-ps1A0A1L1SQH2 283 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm14401A2ARV7 303 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 D7Ertd443eD2J0Y4 644 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm17026K7N6Z0 213 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Sema3aO08665 772 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tnfrsf11bO08712 401 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mtnd1P03888 318 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hmx3P42581 356 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rab3aP63011 220 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rps17P63276 135 aaKnown RBP9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc30a3P97441 388 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Sdf4Q61112 361 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 AlcamQ61490 583 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tpd52Q62393 224 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hmgxb4Q80Y32 594 aaKnown RBP9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mical2Q8BML1 960 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gpc5Q8CAL5 572 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Piwil2Q8CDG1 971 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Samd14Q8K070 417 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mapre2Q8R001 326 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Spns1Q8R0G7 528 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc38a4Q8R1S9 547 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr850Q8VFF2 315 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr308Q8VFP2 308 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr1424Q8VFV1 313 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 GneQ91WG8 722 aaKnown RBP9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 CacybpQ9CXW3 229 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mpp5Q9JLB2 675 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Actl7aQ9QY84 440 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Trpc2Q9R244 1172 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 PappaQ8R4K8 1624 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Adam34A2RSG8 714 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Trabd2bB1ATG9 517 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 St8sia2O35696 375 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 IapP03975 557 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hrh3P58406 445 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Polr3bP59470 1133 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rnf157Q3TEL6 685 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Upf3aQ3ULJ3 422 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gpr156Q6PCP7 798 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Smpd4Q6ZPR5 823 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zik1Q80YP6 463 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ppp1r15bQ8BFW3 697 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zadh2Q8BGC4 377 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Slc15a3Q8BPX9 578 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Fmo9Q8C116 539 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zbtb37Q8C3U9 504 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Klhl11Q8CE33 709 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Stau2Q8CJ67 570 aaKnown RBP9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Lrit1Q8K099 624 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gfm2Q8R2Q4 779 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zmynd11Q8R5C8 602 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ing3Q8VEK6 421 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 TmlheQ91ZE0 421 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Kdelr1Q99JH8 212 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ssxb1Q9CPU1 170 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mgrn1Q9D074 532 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rnft1Q9DCN7 395 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 SrrQ9QZX7 339 aa9.67□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Spin2gA0A0N4SW15 236 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ssxb9A2BI93 185 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ssxb8B1AY40 170 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm8113E0CXS8 587 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vmn2r96E9PZU5 664 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 4930544D05RikJ3QK56 214 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Spin2eJ3QNQ0 234 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gm8011K7N6Y5 207 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Snrpd2P62317 118 aaKnown RBP9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 IqcmQ149I8 489 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 LvrnQ2KHK3 559 aa9.66□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Treml2Q2LA85 329 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 64.8 ms