RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Olfr1200A2ATJ4 336 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Rnf169E9Q7F2 694 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Fam181aJ3QNB7 292 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 PlaaP27612 794 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Timm13P62075 95 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Pros1Q08761 675 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Ppp1r14bQ62084 147 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Ift52Q62559 426 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 EfsQ64355 560 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 UnkQ8BL48 810 aaKnown RBP14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Man2a2Q8BRK9 1152 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 FggQ8VCM7 436 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Pcdhb18Q91Y02 792 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Npm3Q9CPP0 175 aaKnown RBP14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Dusp26Q9D700 211 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Slit2Q9R1B9 1521 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Dusp8O09112 663 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Atn1O35126 1175 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Per3O70361 1113 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Fzd1O70421 642 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Scrg1O88745 98 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Wnt7aP24383 349 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 PvalbP32848 110 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Rab21P35282 222 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Tbx4P70325 552 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Ag2Q3UPL5 249 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Zmat1Q3V0C1 714 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 NkaplQ5SZT7 395 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Med22Q62276 200 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Vac14Q80WQ2 782 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Stx16Q8BVI5 326 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 LipmQ8K2A6 422 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Rsph1Q8VIG3 301 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Zfp617Q91WM0 559 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Slco1a5Q91YY5 670 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Yipf2Q99LP8 312 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Mrpl45Q9D0Q7 306 aaKnown RBP14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Plscr1Q9JJ00 328 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Vmn2r59E9PUT5 865 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Olfr603L7N1Y4 312 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Neurod4O09105 330 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 ThrbP37242 461 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Cdh4P39038 913 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Brcc3P46737 291 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Lypla1P97823 230 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Slc6a3Q61327 619 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Cd34Q64314 382 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Serpina3fQ80X76 445 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Svs2Q8BS30 375 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Fam221bQ8C627 487 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Olfr1484Q8VEU6 315 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 LsrQ99KG5 594 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Oxct2bQ9ESL0 520 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Oxct2aQ9JJN4 520 aa14.68□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 SmgcF6VRN1 385 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 DcnP28654 354 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Siah1aP61092 282 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Ap2m1P84091 435 aaKnown RBP14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 AcadsQ07417 412 aaKnown RBP14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Capn3Q64691 821 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Cyp2c54Q6XVG2 490 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Dnajb13Q80Y75 316 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Tbx10Q810F8 385 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Sh3rf3Q8C120 878 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 SynpoQ8CC35 929 aaKnown RBP14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Fbxl8Q8CIG9 374 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Taf10Q8K0H5 218 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Mpp5Q9JLB2 675 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Scgb2b17S4R2V3 82 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 BgnP28653 369 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Stat5aP42230 793 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Meaf6Q2VPQ9 191 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 4930503B20RikQ80ZP0 234 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Syn3Q8JZP2 579 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Rab15Q8K386 212 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Gstm4Q8R5I6 218 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Efcab7Q8VDY4 628 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Zfp61Q923D1 555 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Mettl15Q9DCL4 406 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Akr1a1Q9JII6 325 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Ing1Q9QXV3 279 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Otud3B1AZ99 396 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Gm16494E9Q2Z4 87 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 H2-EaP01904 255 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 P04224 255 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Lsm3P62311 102 aaKnown RBP14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Ipcef1Q5DU31 406 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Fcrl5Q68SN8 596 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Trmt13Q8BYH3 481 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Ubqln1Q8R317 582 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Mri1Q9CQT1 369 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Cntd1Q9D995 334 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Tnfsf13bQ9WU72 309 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Gpr137cE9Q343 423 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 FpgsP48760 587 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Znrf3Q5SSZ7 913 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Rad54bQ6PFE3 886 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 LppQ8BFW7 613 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Tbc1d21Q9D9D3 336 aa14.67□□□□□ -0.06
Pcdh20-201ENSMUST00000061628 Txnrd2Q9JLT4 524 aa14.67□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 95.2 ms