RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Sgo2bJ3QMK1 1167 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rgs2O08849 211 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Phkg1P07934 388 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Spp1P10923 294 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 RxrgP28705 463 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Hsd17b4P51660 735 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cyp2c38P56655 490 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Snx21Q3UR97 363 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Mxd4Q60948 209 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 HiraQ61666 1015 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Olfr1198Q7TR12 308 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Treml1Q8K558 317 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Eif3lQ8QZY1 564 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dennd2dQ91VV4 469 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Atp6v1c2Q99L60 427 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Tmed10Q9D1D4 219 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 NckipsdQ9ESJ4 714 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gsk3bQ9WV60 420 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Mrpl40Q9Z2Q5 206 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f15A0A087WR44 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f12A0A0A0MQP3 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f9A2BFZ7 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f7A2BHG6 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f19A2CG71 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f10A2CG92 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f3A2CGC2 496 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm12800B1AUV4 484 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f13B8JKF6 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 MndalD0QMC3 538 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vmn2r120E9PX34 856 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f2J3QMS5 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f25J3QMV9 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f6J3QMW9 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f26J3QNK2 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f24J3QNQ5 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f8J3QQ50 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm12794L7MTS5 483 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f17L7MU81 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f18L7MU83 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Fgf10O35565 209 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 TpmtO55060 240 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 AladP10518 330 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Chrm1P12657 460 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Serpind1P49182 478 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Adamts19P59509 1210 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f14Q1LZI5 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Mapkapk3Q3UMW7 384 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lsmem1Q3UQS2 128 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 MlipQ5FW52 269 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Btbd35f27Q5FWA1 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Olfr325Q5NCD2 326 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Fam126aQ6P9N1 521 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Taf1cQ6PDZ2 836 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cfap97Q6ZPR1 541 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 RragdQ7TT45 449 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Reps2Q80XA6 521 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Fstl5Q8BFR2 847 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cpsf4Q8BQZ5 211 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 GMCL1P1Q99N64 498 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ccdc77Q9CZH8 489 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Efcab1Q9D3N2 212 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Efhd2Q9D8Y0 240 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 D7h11orf16Q9JJR6 402 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dicer1Q8R418 1916 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pdzd8B9EJ80 1147 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 4930558K02RikE0CXC6 182 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Kdelc2G5E897 503 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 GzmkO35205 263 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rhox6O70238 227 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Kcnn4O89109 425 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Anxa6P14824 673 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 MutP16332 748 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cd19P25918 547 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 CratP47934 626 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Traf6P70196 530 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Lrfn1Q2WF71 766 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Zzz3Q6KAQ7 910 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cd300aQ6SJQ0 318 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Wfikkn2Q7TQN3 571 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Fam83eQ80XS7 481 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gk5Q8BX05 534 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Pdcd2lQ8C5N5 364 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Snx8Q8CFD4 459 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Ttc4Q8R3H9 386 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cadm1Q8R5M8 456 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cdhr5Q8VHF2 831 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 GneQ91WG8 722 aaKnown RBP9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Slc5a2Q923I7 670 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 TrabdQ99JY4 376 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rfc5Q9D0F6 339 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 TrirQ9D735 173 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Dhx34Q9DBV3 1145 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 RhoaQ9QUI0 193 aa9.66□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Gm45713A0A1B0GS68 446 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Adh6aE9Q5Z6 375 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Vmn2r88L7N1W8 857 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Rgs4O08899 205 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Hnf4aP49698 474 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 Cyp2c37P56654 490 aa9.65□□□□□ -0.86
Pcdh1-201ENSMUST00000057185 OxtrP97926 388 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms