RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 MydgfQ9CPT4 166 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm5819E9PZ96 154 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm3594E9Q2A7 267 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Vmn2r109K7N747 858 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Gm3486L7N2D0 199 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Syn1O88935 706 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Ugt2b17P17717 530 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 LynP25911 512 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 CremP27699 357 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Hps5P59438 1126 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Tssk1bQ61241 365 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Krt40Q6IFX3 439 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Rassf2Q8BMS9 326 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Sytl2Q99N50 950 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Nek7Q9ES74 302 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Akr1a1Q9JII6 325 aa8.9□□□□□ -0.98
Clcn3-202ENSMUST00000056508 Olfr1480A0A140LIR8 359 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Klhdc7bA0A286YD60 1263 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cyp2a4P15392 494 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Irs1P35569 1233 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 SmoP56726 793 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 NfkbidQ2TB02 327 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Pdlim7Q3TJD7 457 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 HexdcQ3U4H6 486 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Dio1Q61153 257 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gal3st2Q6XQH0 394 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Plekha8Q80W71 519 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Rmnd5aQ80YQ8 391 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 QpctlQ8BH73 383 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Stxbp5Q8K400 1152 aaKnown RBP8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 OtoaQ8K561 1137 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Dnttip1Q99LB0 328 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Mrpl45Q9D0Q7 306 aaKnown RBP8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Katnal2Q9D3R6 539 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 4921524L21RikQ9D5T2 438 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Serinc3Q9QZI9 472 aa8.9□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gm43738A0A0G2JEA5 862 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Krt24A1L317 512 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cd300ld2A2A7W0 305 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cd300ld4A2A7W1 245 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Rab21P35282 222 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gli1P47806 1111 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 TdgP56581 421 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Pag1Q3U1F9 429 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Fam83fQ3UKU4 495 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Spdye4aQ5IBH6 268 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Il18r1Q61098 537 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Serpinf2Q61247 491 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cacna2d2Q6PHS9 1154 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cd300ld3Q6SJQ5 245 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 TwistnbQ78WZ7 330 aaKnown RBP8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Reps2Q80XA6 521 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Rab9bQ8BHH2 201 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Prox2Q8BII1 593 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Phf11aQ8BVM9 293 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 E4f1Q8CCE9 783 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Adam4Q8CGQ2 763 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Cbx7Q8VDS3 158 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 GldcQ91W43 1025 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 GckrQ91X44 587 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Ms4a6bQ99N09 244 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Tm9sf3Q9ET30 587 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Dmrta2A2A9A2 531 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gm14781A2A9Q9 366 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Slc35d1A2AKQ0 355 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Olfr1129A2AV41 314 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Mup17B5X0G2 180 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Vmn2r104E9Q2J5 860 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gm6811E9Q3Y8 510 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Mup13L7N222 235 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Dpysl2O08553 572 aaKnown RBP8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Kcnk1O08581 336 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Mkln1O89050 735 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Fgf18O89101 207 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 LckP06240 509 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Fdft1P53798 416 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 OxtrP97926 388 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Ccdc92bQ5SUE3 299 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 HnrnpdQ60668 355 aaKnown RBP8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Rbm45Q8BHN5 476 aaKnown RBP8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Plekhs1Q8BW88 474 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Slc43a2Q8CGA3 568 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Crb3Q8QZT4 113 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Mgat5Q8R4G6 740 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Olfr862Q8VFJ1 306 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Dennd2dQ91VV4 469 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 MynnQ99MD8 610 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Uqcrc1Q9CZ13 480 aaKnown RBP8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Serpinb7Q9D695 380 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Avpi1Q9D7H4 142 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gm13723A0A1L1SUP2 315 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Gm3159K7N760 267 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Vmn2r71L7N2D8 855 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Rgs5O08850 181 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 C9P06683 548 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 HckP08103 524 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 CnpP16330 420 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Pth1rP41593 591 aa8.89□□□□□ -0.99
Clcn3-202ENSMUST00000056508 Ccr1P51675 355 aa8.89□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms