RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 PIGGQ5H8A4 983 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 RETSATQ6NUM9 610 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 RNF111Q6ZNA4 994 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 KBTBD6Q86V97 674 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 ITFG1Q8TB96 612 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 EXT2Q93063 718 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 LMLNQ96KR4 655 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 ASB2Q96Q27 587 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 ATOH8Q96SQ7 321 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 CDRT15Q96T59 188 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 ADGRE3Q9BY15 652 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 CCDC68Q9H2F9 335 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 TNKS2Q9H2K2 1166 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 MED16Q9Y2X0 877 aa15□□□□□ -0.01
TRIM3-215ENST00000639856 H3BMM5 538 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 NDUFS3O75489 264 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 RHOBTB1O94844 696 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 ENO3P13929 434 aaPredicted RBP14.99□□□□□ -0.01
TRIM3-215ENST00000639856 TSPAN8P19075 237 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 FMO4P31512 558 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 MAGEA10P43363 369 aaPredicted RBP14.99□□□□□ -0.01
TRIM3-215ENST00000639856 ERVK-21P61565 698 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 KLC1Q07866 573 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 ART3Q13508 389 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 FUT11Q495W5 492 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 CLEC6AQ6EIG7 209 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 IRGCQ6NXR0 463 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 CAMK1DQ8IU85 385 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 EFHBQ8N7U6 833 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 PTGR2Q8N8N7 351 aaPredicted RBP14.99□□□□□ -0.01
TRIM3-215ENST00000639856 HIPK4Q8NE63 616 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 ACDQ96AP0 544 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 WDR41Q9HAD4 459 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 PCDHB9Q9Y5E1 797 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 WNT6Q9Y6F9 365 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 CCDC189A1A4V9 331 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 UBXN8O00124 270 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 UBDO15205 165 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 ZNF821O75541 412 aaPredicted RBP14.99□□□□□ -0.01
TRIM3-215ENST00000639856 SRP72O76094 671 aaKnown RBP14.99□□□□□ -0.01
TRIM3-215ENST00000639856 THOP1P52888 689 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 SQLEQ14534 574 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 PPP1R3AQ16821 1122 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 ZNF423Q2M1K9 1284 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 SETMARQ53H47 684 aaPredicted RBP14.99□□□□□ -0.01
TRIM3-215ENST00000639856 PITRM1Q5JRX3 1037 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 PAQR3Q6TCH7 311 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 CYHR1Q6ZMK1 362 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 RAB44Q7Z6P3 723 aaPredicted RBP14.99□□□□□ -0.01
TRIM3-215ENST00000639856 KIAA1191Q96A73 305 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 BBS2Q9BXC9 721 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 DERL2Q9GZP9 239 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 ZDHHC7Q9NXF8 308 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 EVLQ9UI08 416 aaPredicted RBP14.99□□□□□ -0.01
TRIM3-215ENST00000639856 PACSIN3Q9UKS6 424 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 FAM50BQ9Y247 325 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 C2orf16Q68DN1 1984 aa14.99□□□□□ -0.01
TRIM3-215ENST00000639856 GPC4O75487 556 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 CDH13P55290 713 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 SH3BP2P78314 561 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 MRPS35P82673 323 aaKnown RBP14.98□□□□□ -0.01
TRIM3-215ENST00000639856 PFKFB4Q16877 469 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 DGKKQ5KSL6 1271 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 IZUMO2Q6UXV1 221 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 TMC5Q6UXY8 1006 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 CLYBLQ8N0X4 340 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 LEMD2Q8NC56 503 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 HMGCLL1Q8TB92 370 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 STAG3L4Q8TBR4 150 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 NPAS2Q99743 824 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 ECSITQ9BQ95 431 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 VPS9D1Q9Y2B5 631 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 MRPS23Q9Y3D9 190 aaKnown RBP14.98□□□□□ -0.01
TRIM3-215ENST00000639856 CFLARO15519 480 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 FZD6O60353 706 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 KERAO60938 352 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 SMNDC1O75940 238 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRIM3-215ENST00000639856 CDK14O94921 469 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 SIX3O95343 332 aaPredicted RBP14.98□□□□□ -0.01
TRIM3-215ENST00000639856 FGF4P08620 206 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 ARSAP15289 507 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 DPP6P42658 865 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 CDKN1CP49918 316 aaPredicted RBP14.98□□□□□ -0.01
TRIM3-215ENST00000639856 ATP6V0D1P61421 351 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 CDC16Q13042 620 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 STX5Q13190 355 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 PTK2BQ14289 1009 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 MAPRE2Q15555 327 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 UGT3A2Q3SY77 523 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 LY6G5CQ5SRR4 150 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 GK5Q6ZS86 529 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 LARP4Q71RC2 724 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRIM3-215ENST00000639856 MYLIPQ8WY64 445 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 SMG7Q92540 1137 aaKnown RBP14.98□□□□□ -0.01
TRIM3-215ENST00000639856 IRF7Q92985 503 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 C19orf60Q96EN9 201 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 LRRC3BQ96PB8 259 aa14.98□□□□□ -0.01
TRIM3-215ENST00000639856 MRPL1Q9BYD6 325 aaKnown RBP14.98□□□□□ -0.01
TRIM3-215ENST00000639856 UTP6Q9NYH9 597 aaKnown RBP14.98□□□□□ -0.01
TRIM3-215ENST00000639856 ADAMTS6Q9UKP5 1117 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms