RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 RNF148Q8N7C7 305 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 DCAF4L2Q8NA75 395 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 HMGCLL1Q8TB92 370 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 ACDQ96AP0 544 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 DUS3LQ96G46 650 aaKnown RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 DCUN1D1Q96GG9 259 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 DEFB118Q96PH6 123 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 FEM1AQ9BSK4 669 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 C2orf49Q9BVC5 232 aaPredicted RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 VN1R3Q9BXE9 311 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 RIC8BQ9NVN3 520 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TMEM181Q9P2C4 612 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 LHX3Q9UBR4 397 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 MED16Q9Y2X0 877 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TRIM17Q9Y577 477 aa12.04□□□□□ -0.48
CLN8-212ENST00000637083 TNPO3Q9Y5L0 923 aaKnown RBP12.04□□□□□ -0.48
CLN8-212ENST00000637083 H0YJX3 145 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 FZD6O60353 706 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 PRSS56P0CW18 603 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 ZNF7P17097 686 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 ATN1P54259 1190 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 FOLH1Q04609 750 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 SETMARQ53H47 684 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 LYPLAL1Q5VWZ2 237 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 C8orf82Q6P1X6 216 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 SH3RF2Q8TEC5 729 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 ZNF483Q8TF39 744 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 NSMCE3Q96MG7 304 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 HGH1Q9BTY7 390 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 COPS7BQ9H9Q2 264 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLN8-212ENST00000637083 NUDT4Q9NZJ9 180 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 CD274Q9NZQ7 290 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 IL17CQ9P0M4 197 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 RIMS3Q9UJD0 308 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 APPL1Q9UKG1 709 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 ZNF711Q9Y462 761 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 ASB3Q9Y575 518 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 AP4S1Q9Y587 144 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 CDC7O00311 574 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 TXNDC9O14530 226 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 PRMT5O14744 637 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 SNAP91O60641 907 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 CD160O95971 181 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 S100BP04271 92 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 ALDOCP09972 364 aaKnown RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 HGFP14210 728 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 LAG3P18627 525 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 TCN1P20061 433 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 RFC2P35250 354 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 CSNK1DP48730 415 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 CYHR1Q6ZMK1 362 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 ADAMTSL2Q86TH1 951 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 GPR65Q8IYL9 337 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 SLC39A11Q8N1S5 342 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 LINGO1Q96FE5 620 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 MYO19Q96H55 970 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 C3orf30Q96M34 536 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 TOX2Q96NM4 488 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 CENPKQ9BS16 269 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 SEMA4BQ9NPR2 832 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 PAK6Q9NQU5 681 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 SDR39U1Q9NRG7 319 aaPredicted RBP12.03□□□□□ -0.48
CLN8-212ENST00000637083 CD300AQ9UGN4 299 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 PCDHB9Q9Y5E1 797 aa12.03□□□□□ -0.48
CLN8-212ENST00000637083 TANC1Q9C0D5 1861 aa12.02□□□□□ -0.48
CLN8-212ENST00000637083 CXorf51AA0A1B0GTR3 108 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 NPEPPSL1A6NEC2 478 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 NIPSNAP2O75323 286 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 PGLSO95336 258 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 CAPNS1P04632 268 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 HDCP19113 662 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 RPS3P23396 243 aaKnown RBP eCLIP12.02□□□□□ -0.49
CLN8-212ENST00000637083 PAX7P23759 505 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 MZF1P28698 734 aaPredicted RBP12.02□□□□□ -0.49
CLN8-212ENST00000637083 RGS4P49798 205 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 APLP1P51693 650 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 BCL2L1Q07817 233 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 BNIP2Q12982 314 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 PDK3Q15120 406 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 RBBP7Q16576 425 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 CTSL3PQ5NE16 218 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 LINGO4Q6UY18 593 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 FRA10AC1Q70Z53 315 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 DDX53Q86TM3 631 aaKnown RBP12.02□□□□□ -0.49
CLN8-212ENST00000637083 DHFR2Q86XF0 187 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 PIANPQ8IYJ0 282 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 MARVELD2Q8N4S9 558 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 MINDY1Q8N5J2 469 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 PAF1Q8N7H5 531 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 GOLM1Q8NBJ4 401 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 SIDT2Q8NBJ9 832 aaKnown RBP12.02□□□□□ -0.49
CLN8-212ENST00000637083 CD200R1Q8TD46 325 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 ZUFSPQ96AP4 578 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 MUC13Q9H3R2 512 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 FBRSL1Q9HCM7 1045 aaKnown RBP12.02□□□□□ -0.49
CLN8-212ENST00000637083 BPIFA1Q9NP55 256 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 MRPL17Q9NRX2 175 aaKnown RBP12.02□□□□□ -0.49
CLN8-212ENST00000637083 SMPD4Q9NXE4 827 aa12.02□□□□□ -0.49
CLN8-212ENST00000637083 SPG21Q9NZD8 308 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms