RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 CXorf21Q9HAI6 301 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 CRYL1Q9Y2S2 319 aa16.41■□□□□ 0.22
CNOT3-208ENST00000613073 MROH6A6NGR9 719 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 H3BMQ9 156 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 CBX4O00257 560 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 LDB2O43679 373 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 SLC4A1P02730 911 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 LDLRAP1Q5SW96 308 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 LIPMQ5VYY2 423 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 CHST15Q7LFX5 561 aaPredicted RBP16.4■□□□□ 0.22
CNOT3-208ENST00000613073 LYSMD3Q7Z3D4 306 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 BHMTQ93088 406 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 VWCEQ96DN2 955 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 TMEM169Q96HH4 297 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 NSMCE3Q96MG7 304 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 COG8Q96MW5 612 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 CDK5RAP1Q96SZ6 601 aaKnown RBP16.4■□□□□ 0.22
CNOT3-208ENST00000613073 OSBPL11Q9BXB4 747 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 CDH19Q9H159 772 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 RPF2Q9H7B2 306 aaKnown RBP16.4■□□□□ 0.22
CNOT3-208ENST00000613073 YIPF1Q9Y548 306 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 GPC6Q9Y625 555 aaPredicted RBP16.4■□□□□ 0.22
CNOT3-208ENST00000613073 RGSL1A5PLK6 1076 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 NEMP2A6NFY4 417 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 H3BNC9 293 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 PRRG1O14668 218 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 DLX3O60479 287 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 APOA4P06727 396 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 ZNF182P17025 639 aaPredicted RBP16.4■□□□□ 0.22
CNOT3-208ENST00000613073 TRAF2Q12933 501 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 RALGDSQ12967 914 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 ARL13AQ5H913 290 aaPredicted RBP16.4■□□□□ 0.22
CNOT3-208ENST00000613073 CILP2Q8IUL8 1156 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 CCNYL1Q8N7R7 359 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 PDZD8Q8NEN9 1154 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 OR13C4Q8NGS5 318 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 FAM110BQ8TC76 370 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 SH3RF2Q8TEC5 729 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 STYXQ8WUJ0 223 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 TADA1Q96BN2 335 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 ZNF597Q96LX8 424 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 SMIM14Q96QK8 99 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.4■□□□□ 0.22
CNOT3-208ENST00000613073 AGO1Q9UL18 857 aaKnown RBP16.4■□□□□ 0.22
CNOT3-208ENST00000613073 AP4S1Q9Y587 144 aa16.4■□□□□ 0.22
CNOT3-208ENST00000613073 BCAS2O75934 225 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-208ENST00000613073 SOD2P04179 222 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 SERPINF2P08697 491 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 ZNF12P17014 697 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 CA8P35219 290 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 RCVRNP35243 200 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 CDH4P55283 916 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 DEFB103AP81534 67 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 TWF1Q12792 350 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 TTC33Q6PID6 262 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-208ENST00000613073 RAVER1Q8IY67 606 aaKnown RBP16.39■□□□□ 0.21
CNOT3-208ENST00000613073 SLC15A4Q8N697 577 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 CALML6Q8TD86 181 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 MAGEH1Q9H213 219 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 TMEM39AQ9NV64 488 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 VPS51Q9UID3 782 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 C1orf232A0A0U1RR37 186 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 SAC3D1A6NKF1 404 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 A8MU76 341 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 HTRA2O43464 458 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-208ENST00000613073 ABLIM3O94929 683 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 PIGNO95427 931 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 RHOCP08134 193 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 MNX1P50219 401 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-208ENST00000613073 POU4F1Q01851 419 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 PMS2P3Q13401 168 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 LSM12Q3MHD2 195 aaKnown RBP16.39■□□□□ 0.21
CNOT3-208ENST00000613073 ZBED5Q49AG3 693 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 METTL21CQ5VZV1 264 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 CINPQ9BW66 212 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-208ENST00000613073 UBA2Q9UBT2 640 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-208ENST00000613073 TANC1Q9C0D5 1861 aa16.39■□□□□ 0.21
CNOT3-208ENST00000613073 TARM1B6A8C7 271 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 LEPRP48357 1165 aaKnown RBP16.38■□□□□ 0.21
CNOT3-208ENST00000613073 SPIDRQ14159 915 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 NEDD8Q15843 81 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 LINGO4Q6UY18 593 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 SLC22A12Q96S37 553 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 ILKAPQ9H0C8 392 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-208ENST00000613073 CYP4F12Q9HCS2 524 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 BCAP29Q9UHQ4 241 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 MID2Q9UJV3 735 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-208ENST00000613073 TMEM114B3SHH9 223 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 TIPRLO75663 272 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 PRSS56P0CW18 603 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 TNK2Q07912 1038 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 ZNF177Q13360 481 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-208ENST00000613073 PTK2BQ14289 1009 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 C5orf22Q49AR2 442 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 HECTD2Q5U5R9 776 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 THOC7Q6I9Y2 204 aaKnown RBP16.38■□□□□ 0.21
CNOT3-208ENST00000613073 CNKSR3Q6P9H4 555 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 ZBTB49Q6ZSB9 765 aa16.38■□□□□ 0.21
CNOT3-208ENST00000613073 KIAA0408Q6ZU52 694 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms