RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	GOLGA6L3	A6NEY3	463 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665		A6NL46	340 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	CBX6	O95503	412 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	SOD1	P00441	154 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	ATP1A1	P05023	1023 aa	Known RBP	12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	CALB1	P05937	261 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	TNFAIP3	P21580	790 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	PTGIR	P43119	386 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	ARL4D	P49703	201 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	ZNF143	P52747	638 aa	Predicted RBP	12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	PER3	P56645	1201 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	CDR2	Q01850	454 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	TUBB3	Q13509	450 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	KLHDC7A	Q5VTJ3	777 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	LRRC66	Q68CR7	880 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	IRGC	Q6NXR0	463 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	DNAJC24	Q6P3W2	148 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	FAM199X	Q6PEV8	388 aa	Predicted RBP	12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	TRIM72	Q6ZMU5	477 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	ARHGAP36	Q6ZRI8	547 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	FAM92B	Q6ZTR7	304 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	TECPR1	Q7Z6L1	1165 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	NUDCD1	Q96RS6	583 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	RUFY1	Q96T51	708 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	NDST4	Q9H3R1	872 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	DHX35	Q9H5Z1	703 aa	Known RBP	12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	ASF1B	Q9NVP2	202 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	GPR83	Q9NYM4	423 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	VPS18	Q9P253	973 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	ENTPD4	Q9Y227	616 aa		12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	FARSA	Q9Y285	508 aa	Known RBP	12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	DIDO1	Q9BTC0	2240 aa	Known RBP	12.12	□□□□□ -0.47
NUP62-223	ENST00000601665	SSU72P8	A0A1W2PR75	194 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665		F8VZ95	297 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	ZNF185	O15231	689 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	KIF1C	O43896	1103 aa	Known RBP	12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	GFPT2	O94808	682 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	PGLS	O95336	258 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	CYP1A1	P04798	512 aa	Predicted RBP	12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	UCHL3	P15374	230 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	EPHB1	P54762	984 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	SLC10A7	Q0GE19	358 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	TRAF2	Q12933	501 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	IL10RA	Q13651	578 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	SYCP1	Q15431	976 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	VWA3B	Q502W6	1294 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	DCUN1D2	Q6PH85	259 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	RFLNA	Q6ZTI6	216 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	TMEM26	Q6ZUK4	368 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	ZNF765	Q7L2R6	523 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	PRSS42	Q7Z5A4	293 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	CISD2	Q8N5K1	135 aa	Known RBP	12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	SIDT2	Q8NBJ9	832 aa	Known RBP	12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	C3orf20	Q8ND61	904 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	FDCSP	Q8NFU4	85 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	NSMCE1	Q8WV22	266 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	MR1	Q95460	341 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	SNRNP40	Q96DI7	357 aa	Known RBP	12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	NSMCE3	Q96MG7	304 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	ZNF599	Q96NL3	588 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	MCEE	Q96PE7	176 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	PLEKHG4B	Q96PX9	1271 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	MCCC1	Q96RQ3	725 aa	Predicted RBP	12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	AGAP2	Q99490	1192 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	CNPY3	Q9BT09	278 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	RIOK2	Q9BVS4	552 aa	Known RBP	12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	STK33	Q9BYT3	514 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	RMI1	Q9H9A7	625 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	UCK1	Q9HA47	277 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	NOD2	Q9HC29	1040 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	SEPT11	Q9NVA2	429 aa	Known RBP	12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	GPATCH2L	Q9NWQ4	482 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	OGFR	Q9NZT2	677 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	SNX7	Q9UNH6	387 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665	AP4E1	Q9UPM8	1137 aa		12.11	□□□□□ -0.47
NUP62-223	ENST00000601665		A0A0U1RQS6	177 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	SIGLEC16	A6NMB1	481 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	PDZK1P1	A8MUH7	402 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	EIF3CL	B5ME19	914 aa	Known RBP	12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	DNAJC6	O75061	913 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	MTA2	O94776	668 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	TMEM63A	O94886	807 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	TIAF1	O95411	115 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	PRF1	P14222	555 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	ZNF30	P17039	623 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	NELFE	P18615	380 aa	Known RBP	12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	CAPZB	P47756	277 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	ITGA1	P56199	1179 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	UBE2I	P63279	158 aa	Known RBP	12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	PTPRR	Q15256	657 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	KYNU	Q16719	465 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	PPP6R3	Q5H9R7	873 aa	Predicted RBP	12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	PWWP2B	Q6NUJ5	590 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	RFX8	Q6ZV50	586 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	NLRP8	Q86W28	1048 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	MCEMP1	Q8IX19	187 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	RBMXL3	Q8N7X1	1067 aa	Known RBP	12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	COX14	Q96I36	57 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	FCRL4	Q96PJ5	515 aa		12.1	□□□□□ -0.47
NUP62-223	ENST00000601665	EIF3C	Q99613	913 aa	Known RBP	12.1	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms