RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	NDUFAF2	Q8N183	169 aa		18.07	■□□□□ 0.48
CIRBP-238	ENST00000592412	FAM71B	Q8TC56	605 aa		18.07	■□□□□ 0.48
CIRBP-238	ENST00000592412	TEKT4	Q8WW24	435 aa		18.07	■□□□□ 0.48
CIRBP-238	ENST00000592412	SH3KBP1	Q96B97	665 aa		18.07	■□□□□ 0.48
CIRBP-238	ENST00000592412	BTBD6	Q96KE9	485 aa		18.07	■□□□□ 0.48
CIRBP-238	ENST00000592412	ISCU	Q9H1K1	167 aa		18.07	■□□□□ 0.48
CIRBP-238	ENST00000592412	PRDM8	Q9NQV8	689 aa		18.07	■□□□□ 0.48
CIRBP-238	ENST00000592412	SCHIP1	Q9P0W5	487 aa	Predicted RBP	18.07	■□□□□ 0.48
CIRBP-238	ENST00000592412	CPNE7	Q9UBL6	633 aa		18.07	■□□□□ 0.48
CIRBP-238	ENST00000592412	ITPR2	Q14571	2701 aa		18.07	■□□□□ 0.48
CIRBP-238	ENST00000592412	KIR2DS5	A0A0G2JLQ3	304 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412		A0A0G2JNG1	304 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	KIR2DS3	K7RE56	304 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	NUAK1	O60285	661 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	GARS	P41250	739 aa	Known RBP	18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	SPINT3	P49223	89 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	EPHB1	P54762	984 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	SH3BP2	P78314	561 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	GALNT2	Q10471	571 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	KLRB1	Q12918	225 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	KIR2DS5	Q14953	304 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	RAVER1	Q8IY67	606 aa	Known RBP	18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	ESX1	Q8N693	406 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	LRRN4	Q8WUT4	740 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	EID2B	Q96D98	161 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	C9orf72	Q96LT7	481 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	PLEKHG4B	Q96PX9	1271 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	STN1	Q9H668	368 aa	Known RBP	18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	MRPL47	Q9HD33	250 aa	Known RBP	18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	ANO10	Q9NW15	660 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	KCTD3	Q9Y597	815 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	SLC30A1	Q9Y6M5	507 aa		18.06	■□□□□ 0.48
CIRBP-238	ENST00000592412	MATN3	O15232	486 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	HLA-DQB2	P05538	268 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	SKIL	P12757	684 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	ARSE	P51690	589 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	MLLT10	P55197	1068 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	STX1A	Q16623	288 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	ZNF648	Q5T619	568 aa	Predicted RBP	18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	NCBP2-AS2	Q69YL0	99 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	CLEC17A	Q6ZS10	378 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	TMEM135	Q86UB9	458 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	LRRC49	Q8IUZ0	686 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	NIPA2	Q8N8Q9	360 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	LPCAT1	Q8NF37	534 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	ULBP3	Q9BZM4	244 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	EPB41L1	Q9H4G0	881 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	RMI1	Q9H9A7	625 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	PCDH9	Q9HC56	1237 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	ARFGAP3	Q9NP61	516 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	RTN4	Q9NQC3	1192 aa	Known RBP	18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	DTL	Q9NZJ0	730 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	ATXN10	Q9UBB4	475 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	CROT	Q9UKG9	612 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	DNPEP	Q9ULA0	475 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	ICE1	Q9Y2F5	2266 aa		18.05	■□□□□ 0.48
CIRBP-238	ENST00000592412	RP1L1	Q8IWN7	2480 aa	Predicted RBP	18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	C1orf232	A0A0U1RR37	186 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	BLACE	A4D250	179 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	GRID2	O43424	1007 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	MMP2	P08253	660 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	MYBL1	P10243	752 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	ZNF8	P17098	575 aa	Predicted RBP	18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	DLST	P36957	453 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	CLCNKA	P51800	687 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	FOXM1	Q08050	763 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	SEPT6	Q14141	434 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	PAFAH1B3	Q15102	231 aa	Known RBP	18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	QPCT	Q16769	361 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	TCTN3	Q6NUS6	607 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	PLXDC1	Q8IUK5	500 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	AOPEP	Q8N6M6	819 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	GALNT6	Q8NCL4	622 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	CARD9	Q9H257	536 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	FAM83D	Q9H4H8	585 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	UCK1	Q9HA47	277 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	RBM22	Q9NW64	420 aa	Known RBP eCLIP	18.04	■□□□□ 0.48	8e-6	■□□□□ 10.3
CIRBP-238	ENST00000592412	RCOR3	Q9P2K3	495 aa	Predicted RBP	18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	SLC23A2	Q9UGH3	650 aa		18.04	■□□□□ 0.48
CIRBP-238	ENST00000592412	OR5K4	A6NMS3	321 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	PDGFA	P04085	211 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	SLC2A4	P14672	509 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	TYRP1	P17643	537 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	SLC19A1	P41440	591 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	LEPR	P48357	1165 aa	Known RBP	18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	ZNF165	P49910	485 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	RPL26	P61254	145 aa	Known RBP	18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	KLHL30	Q0D2K2	578 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	ERV3-1	Q14264	604 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	PIGH	Q14442	188 aa	Predicted RBP	18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	ATP13A4	Q4VNC1	1196 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	FAM182A	Q5T1J6	154 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	HIST2H2BC	Q6DN03	193 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	SASS6	Q6UVJ0	657 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	C6orf15	Q6UXA7	325 aa	Predicted RBP	18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	TMEM26	Q6ZUK4	368 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	CPNE8	Q86YQ8	564 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	FATE1	Q969F0	183 aa		18.03	■□□□□ 0.48
CIRBP-238	ENST00000592412	TRIM11	Q96F44	468 aa		18.03	■□□□□ 0.48

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