RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 CPEB1Q9BZB8 566 aaKnown RBP20.21■□□□□ 0.83
GCDH-214ENST00000591043 CLPBQ9H078 707 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 BPIFA1Q9NP55 256 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 GNPTGQ9UJJ9 305 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 DHRS7Q9Y394 339 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 SCAMP3O14828 347 aaKnown RBP20.21■□□□□ 0.83
GCDH-214ENST00000591043 AZIN1O14977 448 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 RPS17P08708 135 aaKnown RBP20.21■□□□□ 0.83
GCDH-214ENST00000591043 CHRM3P20309 590 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 BMPR1AP36894 532 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 ACADVLP49748 655 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 ART3Q13508 389 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 TPGS1Q6ZTW0 290 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 PCDH20Q8N6Y1 951 aaKnown RBP20.21■□□□□ 0.83
GCDH-214ENST00000591043 EXT2Q93063 718 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 FUBP1Q96AE4 644 aaKnown RBP20.21■□□□□ 0.83
GCDH-214ENST00000591043 C19orf60Q96EN9 201 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 CCT7Q99832 543 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 PPIL1Q9Y3C6 166 aa20.21■□□□□ 0.83
GCDH-214ENST00000591043 MKI67P46013 3256 aaKnown RBP20.2■□□□□ 0.82
GCDH-214ENST00000591043 C1orf232A0A0U1RR37 186 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 K7ERQ8 282 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 BTN3A1O00481 513 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 UBFD1O14562 309 aaKnown RBP20.2■□□□□ 0.82
GCDH-214ENST00000591043 AIM2O14862 343 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 LIN7AO14910 233 aaPredicted RBP20.2■□□□□ 0.82
GCDH-214ENST00000591043 SMAD6O43541 496 aaKnown RBP20.2■□□□□ 0.82
GCDH-214ENST00000591043 CLASP2O75122 1294 aaKnown RBP20.2■□□□□ 0.82
GCDH-214ENST00000591043 ECI2O75521 394 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 CDK14O94921 469 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 HNRNPA1P09651 372 aaKnown RBP eCLIP20.2■□□□□ 0.82
GCDH-214ENST00000591043 TCF3P15923 654 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 CD70P32970 193 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 CDKN1CP49918 316 aaPredicted RBP20.2■□□□□ 0.82
GCDH-214ENST00000591043 STX1BP61266 288 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 FPGSQ05932 587 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 KANK2Q63ZY3 851 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 BNC2Q6ZN30 1099 aaPredicted RBP20.2■□□□□ 0.82
GCDH-214ENST00000591043 LRRC74BQ6ZQY2 392 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 ADAMTSL2Q86TH1 951 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 PLPP6Q8IY26 295 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 DSELQ8IZU8 1212 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 BHMTQ93088 406 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 OTUB2Q96DC9 234 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 ZNF641Q96N77 438 aaPredicted RBP20.2■□□□□ 0.82
GCDH-214ENST00000591043 ZNF570Q96NI8 536 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 TMEM106CQ9BVX2 250 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 MID1IP1Q9NPA3 183 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 NUDT4Q9NZJ9 180 aa20.2■□□□□ 0.82
GCDH-214ENST00000591043 TRBV5-4A0A0C4DH59 114 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 CCL16O15467 120 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 SNX2O60749 519 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 NIPSNAP2O75323 286 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 SRCP12931 536 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 CTPS1P17812 591 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 EEF1DP29692 281 aaKnown RBP20.19■□□□□ 0.82
GCDH-214ENST00000591043 SPAM1P38567 509 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 RGS4P49798 205 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 CLCQ05315 142 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 TAF11Q15544 211 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 TSNQ15631 228 aaKnown RBP20.19■□□□□ 0.82
GCDH-214ENST00000591043 USP45Q70EL2 814 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 LARP4Q71RC2 724 aaKnown RBP eCLIP20.19■□□□□ 0.82
GCDH-214ENST00000591043 GPSM1Q86YR5 675 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 SHKBP1Q8TBC3 707 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 LINGO1Q96FE5 620 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 MRPL1Q9BYD6 325 aaKnown RBP20.19■□□□□ 0.82
GCDH-214ENST00000591043 DPP7Q9UHL4 492 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 FIS1Q9Y3D6 152 aa20.19■□□□□ 0.82
GCDH-214ENST00000591043 TNPO3Q9Y5L0 923 aaKnown RBP20.19■□□□□ 0.82
GCDH-214ENST00000591043 NVLO15381 856 aaKnown RBP20.18■□□□□ 0.82
GCDH-214ENST00000591043 XYLBO75191 536 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 TBX10O75333 385 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 PRAMEF1O95521 474 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 TSPAN12O95859 305 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 CHEK2O96017 543 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 CTNNB1P35222 781 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 MYLK3Q32MK0 819 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 UGT3A2Q3SY77 523 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 TMEM198Q66K66 360 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 PTRHD1Q6GMV3 140 aaKnown RBP20.18■□□□□ 0.82
GCDH-214ENST00000591043 C22orf39Q6P5X5 142 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 TTC16Q8NEE8 873 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 ECHDC3Q96DC8 303 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 SMIM14Q96QK8 99 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 SLC25A23Q9BV35 468 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 TLR9Q9NR96 1032 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 INTS6Q9UL03 887 aaKnown RBP20.18■□□□□ 0.82
GCDH-214ENST00000591043 POMPQ9Y244 141 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 BPTFQ12830 3046 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 PSMD12O00232 456 aaPredicted RBP20.18■□□□□ 0.82
GCDH-214ENST00000591043 GIPC1O14908 333 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 OR1I1O60431 355 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 POP4O95707 220 aaKnown RBP20.18■□□□□ 0.82
GCDH-214ENST00000591043 POU2F2P09086 479 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 ALPIP09923 528 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 HNF1BP35680 557 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 CLCN7P51798 805 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 SH3BP2P78314 561 aa20.18■□□□□ 0.82
GCDH-214ENST00000591043 NFATC2Q13469 925 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms