RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ACTRT2Q8TDY3 377 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 STMN2Q93045 179 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 OTUB2Q96DC9 234 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 PPP1R36Q96LQ0 422 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 THTPAQ9BU02 230 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 TNKS2Q9H2K2 1166 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 TTYH1Q9H313 450 aaPredicted RBP22.49■■□□□ 1.19
CCDC47-204ENST00000582252 MEAF6Q9HAF1 191 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 CCL26Q9Y258 94 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 MED16Q9Y2X0 877 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 SZT2Q5T011 3432 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 SCN8AQ9UQD0 1980 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 DOCK8Q8NF50 2099 aa22.49■■□□□ 1.19
CCDC47-204ENST00000582252 SUPT3HB4E1H0 165 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 PRMT5O14744 637 aaPredicted RBP22.48■■□□□ 1.19
CCDC47-204ENST00000582252 SUPT3HO75486 399 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 TCF3P15923 654 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 CEBPBP17676 345 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 CHRM3P20309 590 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 HLA-FP30511 346 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 CPOXP36551 454 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 HERC3Q15034 1050 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 TRMT5Q32P41 509 aaKnown RBP22.48■■□□□ 1.19
CCDC47-204ENST00000582252 UNC50Q53HI1 259 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 DGKKQ5KSL6 1271 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 CTSL3PQ5NE16 218 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 GRAMD4Q6IC98 578 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 SNX20Q7Z614 316 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 FBXO39Q8N4B4 442 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 ENDOVQ8N8Q3 282 aaKnown RBP22.48■■□□□ 1.19
CCDC47-204ENST00000582252 RP9Q8TA86 221 aaKnown RBP22.48■■□□□ 1.19
CCDC47-204ENST00000582252 LYSMD1Q96S90 227 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 BBS2Q9BXC9 721 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 RGSL1A5PLK6 1076 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 NEDD8-MDP1E9PL57 170 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 H3BMM5 538 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 UBXN8O00124 270 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 SDHDO14521 159 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 LINC01565O15544 149 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 ZNF821O75541 412 aaPredicted RBP22.48■■□□□ 1.19
CCDC47-204ENST00000582252 RPS3P23396 243 aaKnown RBP eCLIP22.48■■□□□ 1.197e-10■■■■□ 20.1
CCDC47-204ENST00000582252 PIK3R1P27986 724 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 KCNC1P48547 511 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 INHBCP55103 352 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 MYLK3Q32MK0 819 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 FUT11Q495W5 492 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 TXNDC11Q6PKC3 985 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 ULK2Q8IYT8 1036 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 CBARPQ8N350 705 aaPredicted RBP22.48■■□□□ 1.19
CCDC47-204ENST00000582252 IRF7Q92985 503 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 FAM136AQ96C01 138 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 CPEB1Q9BZB8 566 aaKnown RBP22.48■■□□□ 1.19
CCDC47-204ENST00000582252 P2RY12Q9H244 342 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 SPHK2Q9NRA0 654 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 TRAF6Q9Y4K3 522 aa22.48■■□□□ 1.19
CCDC47-204ENST00000582252 SLC9A3R1O14745 358 aaPredicted RBP22.47■■□□□ 1.19
CCDC47-204ENST00000582252 PRAMEF1O95521 474 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 PABPC1P11940 636 aaKnown RBP22.47■■□□□ 1.19
CCDC47-204ENST00000582252 HNF1BP35680 557 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 SPAM1P38567 509 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 ADAM15Q13444 863 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 CUL3Q13618 768 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 E2F5Q15329 346 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 PFKFB4Q16877 469 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 SETMARQ53H47 684 aaPredicted RBP22.47■■□□□ 1.19
CCDC47-204ENST00000582252 USP45Q70EL2 814 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 TMEM25Q86YD3 366 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 RBFAQ8N0V3 343 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 FBXO27Q8NI29 283 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 ITFG1Q8TB96 612 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 GRIN3AQ8TCU5 1115 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 ING5Q8WYH8 240 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 RPL10LQ96L21 214 aaKnown RBP22.47■■□□□ 1.19
CCDC47-204ENST00000582252 CLPBQ9H078 707 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 ZNF385DQ9H6B1 395 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 GNPTGQ9UJJ9 305 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 MTF2Q9Y483 593 aaPredicted RBP22.47■■□□□ 1.19
CCDC47-204ENST00000582252 BPTFQ12830 3046 aa22.47■■□□□ 1.19
CCDC47-204ENST00000582252 MEI4A8MW99 385 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 STX16-NPEPL1H3BU86 382 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 STX16O14662 325 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 OR1I1O60431 355 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 NIPSNAP2O75323 286 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 SKAP2O75563 359 aaPredicted RBP22.46■■□□□ 1.19
CCDC47-204ENST00000582252 POP4O95707 220 aaKnown RBP22.46■■□□□ 1.19
CCDC47-204ENST00000582252 POU3F3P20264 500 aaPredicted RBP22.46■■□□□ 1.19
CCDC47-204ENST00000582252 BTKQ06187 659 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 KPNB1Q14974 876 aaKnown RBP22.46■■□□□ 1.19
CCDC47-204ENST00000582252 PTPRRQ15256 657 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 ZNF77Q15935 545 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 GPR33Q49SQ1 333 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 CARD16Q5EG05 197 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 SYCE2Q6PIF2 218 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 CLYBLQ8N0X4 340 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 CD200R1Q8TD46 325 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 ZNF641Q96N77 438 aaPredicted RBP22.46■■□□□ 1.19
CCDC47-204ENST00000582252 OSBPL1AQ9BXW6 950 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 SUV39H2Q9H5I1 410 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 ASB8Q9H765 288 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 NDE1Q9NXR1 346 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms