RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 GSK3BP49841 420 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 CREB5Q02930 508 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 TAMM41Q96BW9 452 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 PPP3R2Q96LZ3 170 aa17.78■□□□□ 0.44
ATPAF1-214ENST00000576409 USP2O75604 605 aaPredicted RBP17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 DIRAS1O95057 198 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 TTPAP49638 278 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 ZNF135P52742 658 aaPredicted RBP17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 BCL2L1Q07817 233 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 INO80DQ53TQ3 878 aaPredicted RBP17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 FAR1Q8WVX9 515 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 LRRC58Q96CX6 371 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 EIF2B3Q9NR50 452 aaKnown RBP17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 ADPRHL2Q9NX46 363 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 PDE10AQ9Y233 779 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 HEMK1Q9Y5R4 338 aaPredicted RBP17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 PTCH2Q9Y6C5 1203 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 CCDC162PA2VCL2 907 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 TBX1O43435 398 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 CCNCP24863 283 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 FMO3P31513 532 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 LSAMPQ13449 338 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 ZNF846Q147U1 533 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 CCNYL2Q5T2Q4 361 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 ZNF614Q8N883 585 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 MCOLN3Q8TDD5 553 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 SLC16A10Q8TF71 515 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 OTUB1Q96FW1 271 aaPredicted RBP17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 GPR22Q99680 433 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 ATG10Q9H0Y0 220 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 TXNRD2Q9NNW7 524 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 TOR4AQ9NXH8 423 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 PDP1Q9P0J1 537 aaPredicted RBP17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 KLHL3Q9UH77 587 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 MAGEL2Q9UJ55 1249 aa17.77■□□□□ 0.44
ATPAF1-214ENST00000576409 NPHS1O60500 1241 aa17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 BEST1O76090 585 aa17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 ANXA5P08758 320 aa17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 HOXB8P17481 243 aaPredicted RBP17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 TKTP29401 623 aaKnown RBP17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 CDH5P33151 784 aaPredicted RBP17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 TCEA2Q15560 299 aa17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 RETSATQ6NUM9 610 aa17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 SIDT2Q8NBJ9 832 aaKnown RBP17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 PPTC7Q8NI37 304 aa17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 AGO1Q9UL18 857 aaKnown RBP17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 C4AP0C0L4 1744 aa17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 C4BP0C0L5 1744 aa17.77■□□□□ 0.43
ATPAF1-214ENST00000576409 BBIP1A8MTZ0 92 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 J3KR12 359 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 NIPSNAP2O75323 286 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 OTCP00480 354 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 DHRS4L1P0CG22 281 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 ATP5C1P36542 298 aaKnown RBP17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 DGKEP52429 567 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 ATN1P54259 1190 aaPredicted RBP17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 TIFABQ6ZNK6 161 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 SHKBP1Q8TBC3 707 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 TMEM169Q96HH4 297 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 ZNF490Q9ULM2 529 aaPredicted RBP17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 ST14Q9Y5Y6 855 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 CLDN25C9JDP6 229 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 BCKDKO14874 412 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 PGLSO95336 258 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 FGF1P05230 155 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 IL12AP29459 219 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 PRKAG1P54619 331 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 ATP6V0D1P61421 351 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 RPS7P62081 194 aaKnown RBP17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 EPS8Q12929 822 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 DUSP4Q13115 394 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 VPS35Q96QK1 796 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 CHCHD6Q9BRQ6 235 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 SLC25A51Q9H1U9 297 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 DYRK4Q9NR20 520 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 PRKAB1Q9Y478 270 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 TRPV2Q9Y5S1 764 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 DYTNA2CJ06 578 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 KPNA5O15131 536 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 ALDH1A1P00352 501 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 HIST2H2ACQ16777 129 aaPredicted RBP17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 HIST2H2AA3Q6FI13 130 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 SLC2A7Q6PXP3 512 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 B3GNT9Q6UX72 402 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 OSTM1Q86WC4 334 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 ELMOD1Q8N336 334 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 C19orf18Q8NEA5 215 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 GRIN3AQ8TCU5 1115 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 PROX1Q92786 737 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 FAM25AB3EWG3 89 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 FAM25CB3EWG5 89 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 FAM25GB3EWG6 89 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 GPIP06744 558 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 IGFBP5P24593 272 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 GPR15P49685 360 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 PLD1Q13393 1074 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 CEP78Q5JTW2 689 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 NUP188Q5SRE5 1749 aa17.76■□□□□ 0.43
ATPAF1-214ENST00000576409 AFTPHQ6ULP2 937 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms