RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 LAMC1P11047 1609 aa4.15□□□□□ -1.74
CHD9-212ENST00000564641 TMEM202A6NGA9 273 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 DVL1O14640 695 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 BCAT2O15382 392 aaPredicted RBP4.15□□□□□ -1.75
CHD9-212ENST00000564641 PAX1P15863 534 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 DDIT3P35638 169 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 METAP2P50579 478 aaKnown RBP eCLIP4.15□□□□□ -1.75
CHD9-212ENST00000564641 DVL1P1P54792 670 aaPredicted RBP4.15□□□□□ -1.75
CHD9-212ENST00000564641 HNRNPH2P55795 449 aaKnown RBP4.15□□□□□ -1.75
CHD9-212ENST00000564641 IRX6P78412 446 aaPredicted RBP4.15□□□□□ -1.75
CHD9-212ENST00000564641 EFNB1P98172 346 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 SLC12A1Q13621 1099 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 TAF5Q15542 800 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 NAA35Q5VZE5 725 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 LRRC8EQ6NSJ5 796 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 ANKRD54Q6NXT1 300 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 CLEC4GQ6UXB4 293 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 ANKRD18AQ8IVF6 992 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 FOXRED2Q8IWF2 684 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 PAF1Q8N7H5 531 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 SLC20A1Q8WUM9 679 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 TAF15Q92804 592 aaKnown RBP eCLIP4.15□□□□□ -1.75
CHD9-212ENST00000564641 DDX4Q9NQI0 724 aaKnown RBP4.15□□□□□ -1.75
CHD9-212ENST00000564641 TMEM160Q9NX00 188 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 FBXO9Q9UK97 447 aaPredicted RBP4.15□□□□□ -1.75
CHD9-212ENST00000564641 PNMA2Q9UL42 364 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 TTC7AQ9ULT0 858 aaPredicted RBP4.15□□□□□ -1.75
CHD9-212ENST00000564641 GPR52Q9Y2T5 361 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 KIF1AQ12756 1690 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 NEXMIFQ5QGS0 1516 aa4.15□□□□□ -1.75
CHD9-212ENST00000564641 METP08581 1390 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 GPRASP1Q5JY77 1395 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 DHX57Q6P158 1386 aaKnown RBP4.14□□□□□ -1.75
CHD9-212ENST00000564641 GAGE10A6NGK3 116 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 GABRB2P47870 512 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 TAF6P49848 677 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 MMP14P50281 582 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 NR0B1P51843 470 aaKnown RBP4.14□□□□□ -1.75
CHD9-212ENST00000564641 PDE1BQ01064 536 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 SREBF2Q12772 1141 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 SGO1Q5FBB7 561 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 GGNBP1Q5YKI7 109 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 MMS22LQ6ZRQ5 1243 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 RRM2BQ7LG56 351 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 NOXA1Q86UR1 476 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 SLC24A4Q8NFF2 622 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 BBS10Q8TAM1 723 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 RUFY2Q8WXA3 655 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 TBC1D20Q96BZ9 403 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 ZNF583Q96ND8 569 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 F2RL3Q96RI0 385 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 CSTL1Q9H114 145 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 HCFC1R1Q9NWW0 138 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 SAGE1Q9NXZ1 904 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 TERF2IPQ9NYB0 399 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 PDP2Q9P2J9 529 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 CNOT7Q9UIV1 285 aaKnown RBP4.14□□□□□ -1.75
CHD9-212ENST00000564641 LOXL2Q9Y4K0 774 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 LRRFIP2Q9Y608 721 aaKnown RBP4.14□□□□□ -1.75
CHD9-212ENST00000564641 NALCNQ8IZF0 1738 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 PPLO60437 1756 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 ABCC11Q96J66 1382 aa4.14□□□□□ -1.75
CHD9-212ENST00000564641 CLTCL1P53675 1640 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 COL22A1Q8NFW1 1626 aaPredicted RBP4.13□□□□□ -1.75
CHD9-212ENST00000564641 NRXN3Q9Y4C0 1643 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 TECPR2O15040 1411 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 BLMP54132 1417 aaPredicted RBP4.13□□□□□ -1.75
CHD9-212ENST00000564641 NAIPQ13075 1403 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 PTPRUQ92729 1446 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.13□□□□□ -1.75
CHD9-212ENST00000564641 A0A1B0GVC2 190 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 TAF4O00268 1085 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 PCDH7O60245 1069 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 WDR1O75083 606 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 TFP02787 698 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 TUBBP07437 444 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 GALTP07902 379 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 G6PDP11413 515 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 FGF5P12034 268 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 KRT5P13647 590 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 BDKRB2P30411 391 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 PSMC2P35998 433 aaKnown RBP4.13□□□□□ -1.75
CHD9-212ENST00000564641 EIF2S3P41091 472 aaKnown RBP4.13□□□□□ -1.75
CHD9-212ENST00000564641 TUBB4BP68371 445 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 GRIK3Q13003 919 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 DDX10Q13206 875 aaKnown RBP4.13□□□□□ -1.75
CHD9-212ENST00000564641 PPIGQ13427 754 aaKnown RBP eCLIP4.13□□□□□ -1.75
CHD9-212ENST00000564641 ZNF667Q5HYK9 610 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 ATG16L1Q676U5 607 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 TMEM81Q6P7N7 255 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 BBS12Q6ZW61 710 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 LRRC8DQ7L1W4 858 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 DGLUCYQ7Z3D6 616 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 UNC5CLQ8IV45 518 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 TRIM63Q969Q1 353 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 ZNF501Q96CX3 271 aaPredicted RBP4.13□□□□□ -1.75
CHD9-212ENST00000564641 NAP1L5Q96NT1 182 aaPredicted RBP4.13□□□□□ -1.75
CHD9-212ENST00000564641 SYT17Q9BSW7 474 aa4.13□□□□□ -1.75
CHD9-212ENST00000564641 H2AFJQ9BTM1 129 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms