RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 GMEB2Q9UKD1 530 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 TUBAL3A6NHL2 446 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 AGAP5A6NIR3 686 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 FUCA1P04066 466 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 MMP8P22894 467 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 CDKN2CP42773 168 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 SLC3A1Q07837 685 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 POU6F1Q14863 301 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 ARHGAP15Q53QZ3 475 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 PGBD2Q6P3X8 592 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 ESX1Q8N693 406 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 SGK3Q96BR1 496 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 VAT1Q99536 393 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 CENPOQ9BU64 300 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 NLNQ9BYT8 704 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 KCTD10Q9H3F6 313 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 MAN1C1Q9NR34 630 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 AGO2Q9UKV8 859 aaKnown RBP6.23□□□□□ -1.41
CLK3-212ENST00000563418 PRELID3BQ9Y3B1 194 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 UGT2A1Q9Y4X1 527 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 ASB4Q9Y574 426 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 ADAM12O43184 909 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 NPHS1O60500 1241 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 SLC19A2O60779 497 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 GNAO1P09471 354 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 ETV5P41161 510 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 P2RX3P56373 397 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 EEFSECP57772 596 aaKnown RBP6.23□□□□□ -1.41
CLK3-212ENST00000563418 CSTF1Q05048 431 aaKnown RBP6.23□□□□□ -1.41
CLK3-212ENST00000563418 BAMBIQ13145 260 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 GRAPQ13588 217 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 FGD3Q5JSP0 725 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 DESI1Q6ICB0 168 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 MFSD7Q6UXD7 560 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 SCUBE3Q8IX30 993 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 EFCAB3Q8N7B9 438 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 ZFYVE1Q9HBF4 777 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 ST3GAL5Q9UNP4 418 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 OR6C65A6NJZ3 312 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 IFNA17P01571 189 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 IFNA4P05014 189 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 TPSB2P20231 275 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 ZNF135P52742 658 aaPredicted RBP6.23□□□□□ -1.41
CLK3-212ENST00000563418 TPSAB1Q15661 275 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 KIZQ2M2Z5 673 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 SBK1Q52WX2 424 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 FOXB2Q5VYV0 432 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 KCTD20Q7Z5Y7 419 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 C3orf58Q8NDZ4 430 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 FUNDC2Q9BWH2 189 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 SNX15Q9NRS6 342 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 H3BN98 237 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 SLC28A2O43868 658 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 TFAP2AP05549 437 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 TFEBP19484 476 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 NAGLUP54802 743 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 TARDBPQ13148 414 aaKnown RBP eCLIP6.23□□□□□ -1.41
CLK3-212ENST00000563418 SEC23AQ15436 765 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 EPGNQ6UW88 154 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 PEG10Q86TG7 708 aaKnown RBP6.23□□□□□ -1.41
CLK3-212ENST00000563418 TXNDC5Q8NBS9 432 aaKnown RBP6.23□□□□□ -1.41
CLK3-212ENST00000563418 NT5DC2Q9H857 520 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 TNPO3Q9Y5L0 923 aaKnown RBP6.23□□□□□ -1.41
CLK3-212ENST00000563418 STX16O14662 325 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 PLIN3O60664 434 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 PPP3R1P63098 170 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 CNTN1Q12860 1018 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 APOFQ13790 326 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 BMT2Q1RMZ1 405 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 PIGGQ5H8A4 983 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 GPAT2Q6NUI2 795 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 VASH1Q7L8A9 365 aaPredicted RBP6.23□□□□□ -1.41
CLK3-212ENST00000563418 SLC34A3Q8N130 599 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 NPLOC4Q8TAT6 608 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 TTC9Q92623 222 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 PPIL3Q9H2H8 161 aaKnown RBP6.23□□□□□ -1.41
CLK3-212ENST00000563418 GAREM1Q9H706 876 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 RCOR3Q9P2K3 495 aaPredicted RBP6.23□□□□□ -1.41
CLK3-212ENST00000563418 TRHDEQ9UKU6 1024 aa6.23□□□□□ -1.41
CLK3-212ENST00000563418 INMT-MINDY4F8WBC2 141 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 BET1O15155 118 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MID1O15344 667 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 GRID2O43424 1007 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 NDUFS3O75489 264 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 PPM1BO75688 479 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 RPS2P15880 293 aaKnown RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 GJA1P17302 382 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 AGTR1P30556 359 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 HNMTP50135 292 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 NDST2P52849 883 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MXD4Q14582 209 aaPredicted RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 ZNF367Q7RTV3 350 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 PTAR1Q7Z6K3 402 aaPredicted RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 COL21A1Q96P44 957 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 PLA2G12BQ9BX93 195 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 SLC6A17Q9H1V8 727 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 RERGLQ9H628 205 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 NTN4Q9HB63 628 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ZBTB26Q9HCK0 441 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MTMR4Q9NYA4 1195 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms