RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ZPBPQ9BS86 351 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 ZSCAN5AQ9BUG6 496 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 SPATA16Q9BXB7 569 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 XPO4Q9C0E2 1151 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 CARD9Q9H257 536 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 MAGEE1Q9HCI5 957 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 CNOT6Q9ULM6 557 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 NENFQ9UMX5 172 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 PRKAB1Q9Y478 270 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC28A2O43868 658 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 NUAK1O60285 661 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 SNX2O60749 519 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 DNAJC6O75061 913 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 ACP5P13686 325 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 F3P13726 295 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 MPSTP25325 297 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 EPHA4P54764 986 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 NFATC2Q13469 925 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 LRRC38Q5VT99 294 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 PDPK2PQ6A1A2 396 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 PLXDC1Q8IUK5 500 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 EXD3Q8N9H8 876 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 KIAA1143Q96AT1 154 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 AGAP3Q96P47 875 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 DNAJC7Q99615 494 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 GPR63Q9BZJ6 419 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC25A51Q9H1U9 297 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 TRIM39Q9HCM9 518 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 DDX56Q9NY93 547 aaKnown RBP13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 TBC1D29Q9UFV1 150 aa13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 FLNBO75369 2602 aaKnown RBP13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 SETXQ7Z333 2677 aaKnown RBP13.47□□□□□ -0.25
SNRPA1-204ENST00000558020 EFCAB7A8K855 629 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 A8MU76 341 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 FADS2P1A8MWK0 482 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 MTA2O94776 668 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 ZIC2O95409 532 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 MMP2P08253 660 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 CSF2RBP32927 897 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 UGT1A3P35503 534 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC1A1P43005 524 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 NR2C2P49116 596 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 CLCNKAP51800 687 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 DCDC1P59894 354 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 KCNC4Q03721 635 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 CDK18Q07002 472 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 NFATC3Q12968 1075 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 TBR1Q16650 682 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 ASTE1Q2TB18 679 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 SKOR2Q2VWA4 1001 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 LINC00303Q3SY05 128 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 ZNF569Q5MCW4 686 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 SNAP47Q5SQN1 464 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC9A4Q6AI14 798 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 CEACAM20Q6UY09 585 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 PRICKLE2Q7Z3G6 844 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 KDELC2Q7Z4H8 507 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 CACNA2D3Q8IZS8 1091 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 PLD5Q8N7P1 536 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 CNTD1Q8N815 330 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 LRRN4Q8WUT4 740 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 JPH3Q8WXH2 748 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 IMP4Q96G21 291 aaKnown RBP13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 WDR24Q96S15 920 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 EFHD1Q9BUP0 239 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 PACSIN1Q9BY11 444 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 FBXO8Q9NRD0 319 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 CPNE7Q9UBL6 633 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 KCNK6Q9Y257 313 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 B3GALT1Q9Y5Z6 326 aa13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 OAS3Q9Y6K5 1087 aaKnown RBP13.46□□□□□ -0.25
SNRPA1-204ENST00000558020 TENM4Q6N022 2769 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 KMOO15229 486 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 MTSS1O43312 755 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 VEGFDO43915 354 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 MAP4P27816 1152 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 MAPK9P45984 424 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 MC2RQ01718 297 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 SRSF6Q13247 344 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 TFDP2Q14188 446 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 GALNT3Q14435 633 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 SLC14A2Q15849 920 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 ARHGAP22Q7Z5H3 698 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 TMC3Q7Z5M5 1100 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 ZNF761Q86XN6 746 aaPredicted RBP13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 RFX6Q8HWS3 928 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 TRIM48Q8IWZ4 208 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 RHOT1Q8IXI2 618 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 TRAM1L1Q8N609 369 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 GLYATL1Q969I3 302 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 CATSPER2Q96P56 530 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 OR2AG1Q9H205 316 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 TRIT1Q9H3H1 467 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 OSGEPL1Q9H4B0 414 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 UCK1Q9HA47 277 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 OCIAD1Q9NX40 245 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 TMEM9Q9P0T7 183 aa13.45□□□□□ -0.26
SNRPA1-204ENST00000558020 ATXN10Q9UBB4 475 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms