RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SLC4A11Q8NBS3 891 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ANKRD7Q92527 254 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 QKIQ96PU8 341 aaKnown RBP eCLIP8.32□□□□□ -1.083e-11■■■■■ 46.3
CHD8-213ENST00000557364 PSKH2Q96QS6 385 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 OR52E6Q96RD3 313 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ACSS3Q9H6R3 686 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 NEUROD4Q9HD90 331 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 FCHO1O14526 889 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 TOP3BO95985 862 aaKnown RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 ZNF30P17039 623 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 SP100P23497 879 aaPredicted RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 TLE2Q04725 743 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 ZNF155Q12901 538 aaPredicted RBP8.32□□□□□ -1.08
CHD8-213ENST00000557364 TMPRSS11BQ86T26 416 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 MCRS1Q96EZ8 462 aa8.32□□□□□ -1.08
CHD8-213ENST00000557364 DUXAA6NLW8 204 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 SLC22A3O75751 556 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 CSTF2P33240 577 aaKnown RBP eCLIP8.31□□□□□ -1.08
CHD8-213ENST00000557364 FMO1Q01740 532 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 RASGEF1BQ0VAM2 473 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 ITGB3BPQ13352 177 aaPredicted RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 FNBP1LQ5T0N5 605 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 DNAJC14Q6Y2X3 702 aaPredicted RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 MOB2Q70IA6 237 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 PNPLA2Q96AD5 504 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 SUSD3Q96L08 255 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 LACRTQ9GZZ8 138 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 WDR26Q9H7D7 661 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 SEC14L3Q9UDX4 400 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 PSMD13Q9UNM6 376 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 CLDN5O00501 218 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 MTRF1O75570 445 aaKnown RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 NOL4O94818 638 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 HNRNPA1P09651 372 aaKnown RBP eCLIP8.31□□□□□ -1.08
CHD8-213ENST00000557364 SPATA31C1P0DKV0 1188 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 ENDOUP21128 410 aaKnown RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 RAB2AP61019 212 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 PTP4A2Q12974 167 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 CCDC92Q53HC0 331 aaPredicted RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 SLC30A9Q6PML9 568 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 PCDH20Q8N6Y1 951 aaKnown RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 MTFMTQ96DP5 389 aaKnown RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 SEMA4AQ9H3S1 761 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 B3GAT2Q9NPZ5 323 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 GDF3Q9NR23 364 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 PAIP2BQ9ULR5 123 aaKnown RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 PHGDHO43175 533 aaKnown RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 AP2A1O95782 977 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 NR2F6P10588 404 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 NAGLUP54802 743 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 TRAF3Q13114 568 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 IRGCQ6NXR0 463 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 LIX1Q8N485 282 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 AMER2Q8N7J2 671 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 CAMKVQ8NCB2 501 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 KBTBD8Q8NFY9 601 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 MDM1Q8TC05 714 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 ARHGAP9Q9BRR9 750 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 ANKHQ9HCJ1 492 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 BPIFA1Q9NP55 256 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 COMMD9Q9P000 198 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 WNT9AO14904 365 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 PRAMEF1O95521 474 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 PRPS2P11908 318 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 KIR3DL1P43629 444 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 MINDY4Q4G0A6 757 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 HID1Q8IV36 788 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 GPR156Q8NFN8 814 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 RFKQ969G6 155 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 MTMR8Q96EF0 704 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 P2RY11Q96G91 374 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 SH3GL2Q99962 352 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 TDRD1Q9BXT4 1180 aaKnown RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 ELL3Q9HB65 397 aaPredicted RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 IL36AQ9UHA7 158 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 PRPF19Q9UMS4 504 aaKnown RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 USP12O75317 370 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 ALPIP09923 528 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 CAPGP40121 348 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 DHPSP49366 369 aaPredicted RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 TRIM32Q13049 653 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 TTC27Q6P3X3 843 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 CFAP206Q8IYR0 622 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 GLB1L3Q8NCI6 653 aaPredicted RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 NEK7Q8TDX7 302 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 DQX1Q8TE96 717 aaKnown RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 USP6NLQ92738 828 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 NUS1Q96E22 293 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 ZBED6CLQ96FA7 236 aaPredicted RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 SIPA1Q96FS4 1042 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 MBD2Q9UBB5 411 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 CDH7Q9ULB5 785 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 BTBD3Q9Y2F9 522 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 B4GALT5O43286 388 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 OR10H3O60404 316 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 WBP4O75554 376 aaKnown RBP8.31□□□□□ -1.08
CHD8-213ENST00000557364 MAPK12P53778 367 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 LPIN1Q14693 890 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 EEF1DP3Q658K8 133 aa8.31□□□□□ -1.08
CHD8-213ENST00000557364 IL31RAQ8NI17 732 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms