RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 TDRD6O60522 2096 aaKnown RBP15.27■□□□□ 0.03
PRPF40B-211ENST00000551063 B4DGG1 531 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 VEGFDO43915 354 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 OPA1O60313 960 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 NOBOXO60393 691 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 AK4P27144 223 aaPredicted RBP15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 SEMA5AQ13591 1074 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 SNX1Q13596 522 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 SPARCL1Q14515 664 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 ATP13A5Q4VNC0 1218 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 C14orf28Q4W4Y0 310 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 SLC30A9Q6PML9 568 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 LINC00523Q86TU6 105 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 C17orf82Q86X59 251 aaPredicted RBP15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 PROSER1Q86XN7 944 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 MAPK15Q8TD08 544 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 TRMT1Q9NXH9 659 aaKnown RBP15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 ATXN10Q9UBB4 475 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 CLCA2Q9UQC9 943 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 ARL5AQ9Y689 179 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 KNTC1P50748 2209 aa15.26■□□□□ 0.03
PRPF40B-211ENST00000551063 GRID2O43424 1007 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 BUD23O43709 281 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 SUN1O94901 812 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 CAPNS1P04632 268 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 JUPP14923 745 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 ACTR1BP42025 376 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 ZNF140P52738 457 aaPredicted RBP15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 ACTR1AP61163 376 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 CCDC173Q0VFZ6 552 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 HLTFQ14527 1009 aaKnown RBP eCLIP15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 PERM1Q5SV97 790 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 CERCAMQ5T4B2 595 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 CDCP2Q5VXM1 449 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 FAM151BQ6UXP7 276 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 C4orf22Q6V702 233 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 ADGRG6Q86SQ4 1221 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 DCBLD1Q8N8Z6 715 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 PRELID2Q8N945 189 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 DDHD1Q8NEL9 900 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 OR4K2Q8NGD2 314 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 ZDHHC1Q8WTX9 485 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 NAP1L3Q99457 506 aaPredicted RBP15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 ZCCHC2Q9C0B9 1178 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 OR2AG1Q9H205 316 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 CCDC86Q9H6F5 360 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 ETNK1Q9HBU6 452 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 RAB6BQ9NRW1 208 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 SPATS2LQ9NUQ6 558 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 APPL1Q9UKG1 709 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 RALYQ9UKM9 306 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 TMPRSS11EQ9UL52 423 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 PCYT1BQ9Y5K3 369 aaPredicted RBP15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 ST14Q9Y5Y6 855 aa15.25■□□□□ 0.03
PRPF40B-211ENST00000551063 FAM208BQ5VWN6 2430 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 E7EVH7 732 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 PGRMC1O00264 195 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 CES2O00748 559 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 GAPDHSO14556 408 aaPredicted RBP15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 CHUKO15111 745 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 NUDT21O43809 227 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 TCEA3O75764 348 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 PRAMEF1O95521 474 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 MT-CO3P00414 261 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 PNLIPP16233 465 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 GLB1P16278 677 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 ZNF8P17098 575 aaPredicted RBP15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 HADHAP40939 763 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 CLDN6P56747 220 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 CDH17Q12864 832 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 GTF2H3Q13889 308 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 CHRNA6Q15825 494 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 LDLRAP1Q5SW96 308 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 TAB3Q8N5C8 712 aaPredicted RBP15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 GLIS1Q8NBF1 620 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 CCDC74AQ96AQ1 378 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 DEPDC7Q96QD5 511 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 OSBPL9Q96SU4 736 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 CCDC3Q9BQI4 270 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 ABCG4Q9H172 646 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 EIF2B3Q9NR50 452 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 ZNHIT2Q9UHR6 403 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 FKBPLQ9UIM3 349 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 CFAP47Q6ZTR5 3102 aa15.24■□□□□ 0.03
PRPF40B-211ENST00000551063 FAM149AA5PLN7 773 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 USP27XA6NNY8 438 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 TAF4O00268 1085 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 LDB2O43679 373 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 CDK14O94921 469 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 GAS8O95995 478 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 ACP5P13686 325 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 ETS1P14921 441 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 RPL22P35268 128 aaKnown RBP15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 LMAN1P49257 510 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 CLCNKAP51800 687 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 CAMK2BQ13554 666 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 PTPRCAPQ14761 206 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 KHDC1Q4VXA5 237 aaKnown RBP15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 GPRC6AQ5T6X5 926 aa15.23■□□□□ 0.03
PRPF40B-211ENST00000551063 GSTA5Q7RTV2 222 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms