RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 LAMA1P25391 3075 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 H7C0S8 307 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 CDX4O14627 284 aaPredicted RBP17.06■□□□□ 0.32
BRF1-217ENST00000550375 FOXD2O60548 495 aaPredicted RBP17.06■□□□□ 0.32
BRF1-217ENST00000550375 SDC3O75056 442 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 MTX2O75431 263 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 ITGALP20701 1170 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 PSMA3P25788 255 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 ARRB1P49407 418 aaPredicted RBP17.06■□□□□ 0.32
BRF1-217ENST00000550375 CDKN1CP49918 316 aaPredicted RBP17.06■□□□□ 0.32
BRF1-217ENST00000550375 PLTPP55058 493 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 ARL4CP56559 192 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 SRP54P61011 504 aaKnown RBP17.06■□□□□ 0.32
BRF1-217ENST00000550375 PRAMEP78395 509 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 PPARDQ03181 441 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 SMAD1Q15797 465 aaKnown RBP17.06■□□□□ 0.32
BRF1-217ENST00000550375 HIF1AQ16665 826 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 UAP1L1Q3KQV9 507 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 GLE1Q53GS7 698 aaKnown RBP17.06■□□□□ 0.32
BRF1-217ENST00000550375 TAS2R42Q7RTR8 314 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 PHYKPLQ8IUZ5 450 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 PHACTR4Q8IZ21 702 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 RBFAQ8N0V3 343 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 DTX3LQ8TDB6 740 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 PTCD2Q8WV60 388 aaKnown RBP17.06■□□□□ 0.32
BRF1-217ENST00000550375 OR1E3Q8WZA6 343 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 MFSD3Q96ES6 412 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 PDXPQ96GD0 296 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 VPS35Q96QK1 796 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 TCEAL2Q9H3H9 227 aaPredicted RBP17.06■□□□□ 0.32
BRF1-217ENST00000550375 EPB41L5Q9HCM4 733 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 CYP4F12Q9HCS2 524 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 TREX1Q9NSU2 369 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 CRLS1Q9UJA2 301 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 RIMKLBQ9ULI2 386 aa17.06■□□□□ 0.32
BRF1-217ENST00000550375 A0A1B0GTQ1 180 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.05■□□□□ 0.32
BRF1-217ENST00000550375 MAGEB16A2A368 324 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 C4orf47A7E2U8 309 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 GOT2P00505 430 aaKnown RBP17.05■□□□□ 0.32
BRF1-217ENST00000550375 CEACAM5P06731 702 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 JUNDP17535 347 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 ACVR1Q04771 509 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 BNIP3Q12983 259 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 NFATC2Q13469 925 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 SHBQ15464 509 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 TCEA2Q15560 299 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 KHDC1Q4VXA5 237 aaKnown RBP17.05■□□□□ 0.32
BRF1-217ENST00000550375 SNX20Q7Z614 316 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 OXR1Q8N573 874 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 ART4Q93070 314 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 ZNF669Q96BR6 464 aaPredicted RBP17.05■□□□□ 0.32
BRF1-217ENST00000550375 STAMBPL1Q96FJ0 436 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 OR2AG1Q9H205 316 aa17.05■□□□□ 0.32
BRF1-217ENST00000550375 FAM237BA0A1B0GVD1 139 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 PRSS38A1L453 326 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 H3BM21 787 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 TNFRSF10CO14798 259 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 DFNA5O60443 496 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 RASGRP1O95267 797 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 TNFP01375 233 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 FUCA1P04066 466 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 CSF2P04141 144 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 RHOXF2BP0C7M4 288 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 NME1P15531 152 aaKnown RBP17.04■□□□□ 0.32
BRF1-217ENST00000550375 GNPDA1P46926 289 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 CCT8P50990 548 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 HK3P52790 923 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 DRG2P55039 364 aaKnown RBP17.04■□□□□ 0.32
BRF1-217ENST00000550375 CACNG1Q06432 222 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 PDIA2Q13087 525 aaKnown RBP17.04■□□□□ 0.32
BRF1-217ENST00000550375 GPRC6AQ5T6X5 926 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 PSAPL1Q6NUJ1 521 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 ZDHHC24Q6UX98 284 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 GATAD2AQ86YP4 633 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 ANKMY2Q8IV38 441 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 IGDCC3Q8IVU1 814 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 PEX13Q92968 403 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 FCRL3Q96P31 734 aaPredicted RBP17.04■□□□□ 0.32
BRF1-217ENST00000550375 RHOXF2Q9BQY4 288 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 SLC13A1Q9BZW2 595 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 CARS2Q9HA77 564 aaKnown RBP17.04■□□□□ 0.32
BRF1-217ENST00000550375 TRIM39Q9HCM9 518 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 TM7SF3Q9NS93 570 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 ATXN10Q9UBB4 475 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 APOBEC3BQ9UH17 382 aaKnown RBP17.04■□□□□ 0.32
BRF1-217ENST00000550375 SUFUQ9UMX1 484 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 CHMP2BQ9UQN3 213 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 SLC17A4Q9Y2C5 497 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 RPS6KL1Q9Y6S9 549 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 ASCC3Q8N3C0 2202 aaKnown RBP17.04■□□□□ 0.32
BRF1-217ENST00000550375 SPTBN4Q9H254 2564 aa17.04■□□□□ 0.32
BRF1-217ENST00000550375 VAPBO95292 243 aa17.03■□□□□ 0.32
BRF1-217ENST00000550375 EPHA8P29322 1005 aaPredicted RBP17.03■□□□□ 0.32
BRF1-217ENST00000550375 AKT1P31749 480 aa17.03■□□□□ 0.32
BRF1-217ENST00000550375 FOXN2P32314 431 aa17.03■□□□□ 0.32
BRF1-217ENST00000550375 ELK3P41970 407 aa17.03■□□□□ 0.32
BRF1-217ENST00000550375 RXRGP48443 463 aa17.03■□□□□ 0.32
BRF1-217ENST00000550375 HNRNPKP61978 463 aaKnown RBP eCLIP17.03■□□□□ 0.32
BRF1-217ENST00000550375 CAV1Q03135 178 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms