RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 ACTR1BP42025 376 aa16.09■□□□□ 0.17
CIT-212ENST00000543239 ACTR1AP61163 376 aa16.09■□□□□ 0.17
CIT-212ENST00000543239 TARDBPQ13148 414 aaKnown RBP eCLIP16.09■□□□□ 0.17
CIT-212ENST00000543239 MSLNQ13421 630 aaPredicted RBP16.09■□□□□ 0.17
CIT-212ENST00000543239 ITGA9Q13797 1035 aa16.09■□□□□ 0.17
CIT-212ENST00000543239 ATP13A5Q4VNC0 1218 aa16.09■□□□□ 0.17
CIT-212ENST00000543239 CERCAMQ5T4B2 595 aa16.09■□□□□ 0.17
CIT-212ENST00000543239 C17orf82Q86X59 251 aaPredicted RBP16.09■□□□□ 0.17
CIT-212ENST00000543239 REXO1L1PQ8IX06 675 aa16.09■□□□□ 0.17
CIT-212ENST00000543239 ZDHHC1Q8WTX9 485 aa16.09■□□□□ 0.17
CIT-212ENST00000543239 CCDC74AQ96AQ1 378 aa16.09■□□□□ 0.17
CIT-212ENST00000543239 OR2AG1Q9H205 316 aa16.09■□□□□ 0.17
CIT-212ENST00000543239 ATXN10Q9UBB4 475 aa16.09■□□□□ 0.17
CIT-212ENST00000543239 ARL5AQ9Y689 179 aa16.09■□□□□ 0.17
CIT-212ENST00000543239 CHUKO15111 745 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 GRID2O43424 1007 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 BUD23O43709 281 aaKnown RBP16.08■□□□□ 0.16
CIT-212ENST00000543239 CEP104O60308 925 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 IFNB1P01574 187 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 MSNP26038 577 aaKnown RBP16.08■□□□□ 0.16
CIT-212ENST00000543239 FDFT1P37268 417 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 SNX1Q13596 522 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 SPARCL1Q14515 664 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 ADGRG6Q86SQ4 1221 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 LINC00523Q86TU6 105 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 MARCH9Q86YJ5 346 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 GRAMD1AQ96CP6 724 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 NRSN2Q9GZP1 204 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 HOMER3Q9NSC5 361 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 SMOXQ9NWM0 555 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 DKK4Q9UBT3 224 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 APPL1Q9UKG1 709 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 TMPRSS11EQ9UL52 423 aa16.08■□□□□ 0.16
CIT-212ENST00000543239 DRG1Q9Y295 367 aaKnown RBP16.08■□□□□ 0.16
CIT-212ENST00000543239 PCYT1BQ9Y5K3 369 aaPredicted RBP16.08■□□□□ 0.16
CIT-212ENST00000543239 TRABD2BA6NFA1 517 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 GAPDHSO14556 408 aaPredicted RBP16.07■□□□□ 0.16
CIT-212ENST00000543239 CAPNS1P04632 268 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 ZNF8P17098 575 aaPredicted RBP16.07■□□□□ 0.16
CIT-212ENST00000543239 CXCR5P32302 372 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 CLCNKAP51800 687 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 CHRNA6Q15825 494 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 LONRF2Q1L5Z9 754 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 LDLRAP1Q5SW96 308 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 FAM151BQ6UXP7 276 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 RBM44Q6ZP01 1051 aaKnown RBP16.07■□□□□ 0.16
CIT-212ENST00000543239 CHST15Q7LFX5 561 aaPredicted RBP16.07■□□□□ 0.16
CIT-212ENST00000543239 NAGSQ8N159 534 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 CCDC89Q8N998 374 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 DDHD1Q8NEL9 900 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 OR4K2Q8NGD2 314 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 ZCCHC14Q8WYQ9 949 aaKnown RBP16.07■□□□□ 0.16
CIT-212ENST00000543239 NXPE2Q96DL1 559 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 ZCCHC2Q9C0B9 1178 aaKnown RBP16.07■□□□□ 0.16
CIT-212ENST00000543239 ARFGAP3Q9NP61 516 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 PAK5Q9P286 719 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 LRIT1Q9P2V4 623 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 RABGEF1Q9UJ41 708 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 PRKAB1Q9Y478 270 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 PLEKHM1Q9Y4G2 1056 aa16.07■□□□□ 0.16
CIT-212ENST00000543239 ZNF106Q9H2Y7 1883 aaKnown RBP16.07■□□□□ 0.16
CIT-212ENST00000543239 NTN3O00634 580 aaPredicted RBP16.06■□□□□ 0.16
CIT-212ENST00000543239 CDK14O94921 469 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 PRAMEF1O95521 474 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 ECEL1O95672 775 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 ACP5P13686 325 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 HADHAP40939 763 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 ZNF140P52738 457 aaPredicted RBP16.06■□□□□ 0.16
CIT-212ENST00000543239 SEMA5AQ13591 1074 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 SPIDRQ14159 915 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 ST3GAL2Q16842 350 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 ISXQ2M1V0 245 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 ZNF648Q5T619 568 aaPredicted RBP16.06■□□□□ 0.16
CIT-212ENST00000543239 C4orf22Q6V702 233 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 ZNF438Q7Z4V0 828 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 LRRTM4Q86VH4 590 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 SFTPA2Q8IWL1 248 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 RASGEF1CQ8N431 466 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 GDAP1Q8TB36 358 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 PBKQ96KB5 322 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 CCDC86Q9H6F5 360 aaKnown RBP16.06■□□□□ 0.16
CIT-212ENST00000543239 ETNK1Q9HBU6 452 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 TTC7AQ9ULT0 858 aaPredicted RBP16.06■□□□□ 0.16
CIT-212ENST00000543239 RNF215Q9Y6U7 377 aa16.06■□□□□ 0.16
CIT-212ENST00000543239 COL27A1Q8IZC6 1860 aaPredicted RBP16.05■□□□□ 0.16
CIT-212ENST00000543239 ASXL3Q9C0F0 2248 aa16.05■□□□□ 0.16
CIT-212ENST00000543239 E7EVH7 732 aa16.05■□□□□ 0.16
CIT-212ENST00000543239 KMOO15229 486 aa16.05■□□□□ 0.16
CIT-212ENST00000543239 ZW10O43264 779 aa16.05■□□□□ 0.16
CIT-212ENST00000543239 LDB2O43679 373 aa16.05■□□□□ 0.16
CIT-212ENST00000543239 KIF5CO60282 957 aa16.05■□□□□ 0.16
CIT-212ENST00000543239 CSO75390 466 aaKnown RBP16.05■□□□□ 0.16
CIT-212ENST00000543239 MTX2O75431 263 aa16.05■□□□□ 0.16
CIT-212ENST00000543239 SUN1O94901 812 aa16.05■□□□□ 0.16
CIT-212ENST00000543239 SLC2A4P14672 509 aa16.05■□□□□ 0.16
CIT-212ENST00000543239 MAZP56270 477 aaKnown RBP16.05■□□□□ 0.16
CIT-212ENST00000543239 TMEM115Q12893 351 aaPredicted RBP16.05■□□□□ 0.16
CIT-212ENST00000543239 GTF2H3Q13889 308 aa16.05■□□□□ 0.16
CIT-212ENST00000543239 PTPRCAPQ14761 206 aa16.05■□□□□ 0.16
CIT-212ENST00000543239 NR1D2Q14995 579 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms