RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 PNLIPP16233 465 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 GLB1P16278 677 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 OLIG2Q13516 323 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 RTP5Q14D33 572 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 SIX1Q15475 284 aaPredicted RBP15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 ZDHHC20Q5W0Z9 365 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 SLC30A9Q6PML9 568 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 ARHGEF18Q6ZSZ5 1173 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 GLT6D1Q7Z4J2 308 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 ADGRG6Q86SQ4 1221 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 DEPDC7Q96QD5 511 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 APOL2Q9BQE5 337 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 CCDC86Q9H6F5 360 aaKnown RBP15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 ATXN10Q9UBB4 475 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 ZMIZ1Q9ULJ6 1067 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 CHUKO15111 745 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 NUDT21O43809 227 aaKnown RBP15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 SLC25A14O95258 325 aaPredicted RBP15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 ZNF8P17098 575 aaPredicted RBP15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 STIP1P31948 543 aaKnown RBP15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 ACTR1BP42025 376 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 ACTR1AP61163 376 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 PEX6Q13608 980 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 ATP13A5Q4VNC0 1218 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 ZNF438Q7Z4V0 828 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 PROSER1Q86XN7 944 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 PHYKPLQ8IUZ5 450 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 MDM1Q8TC05 714 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 ZDHHC1Q8WTX9 485 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 C19orf43Q9BQ61 176 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 TBL1YQ9BQ87 522 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 OR2AG1Q9H205 316 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 ARFGAP3Q9NP61 516 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 ZNHIT2Q9UHR6 403 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 FEZ2Q9UHY8 353 aaPredicted RBP15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 PRKAB1Q9Y478 270 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 PCDHB1Q9Y5F3 818 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 RNF215Q9Y6U7 377 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 ACACAQ13085 2346 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 NBEAQ8NFP9 2946 aa15.29■□□□□ 0.04
ECHDC2-223ENST00000542552 GRID2O43424 1007 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 BUD23O43709 281 aaKnown RBP15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 USP12O75317 370 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 CSO75390 466 aaKnown RBP15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 ECEL1O95672 775 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 SPAM1P38567 509 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 CYP4F3Q08477 520 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 SPARCL1Q14515 664 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 PTPRCAPQ14761 206 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 NR1D2Q14995 579 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 TAF1AQ15573 450 aaPredicted RBP15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 CHRNA6Q15825 494 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 ISXQ2M1V0 245 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 P3H1Q32P28 736 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 KHDC1Q4VXA5 237 aaKnown RBP15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 ZNF648Q5T619 568 aaPredicted RBP15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 RBM44Q6ZP01 1051 aaKnown RBP15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 NAGSQ8N159 534 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 ARL14Q8N4G2 192 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 BRSK1Q8TDC3 778 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 C1orf54Q8WWF1 131 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 GRAMD1AQ96CP6 724 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 NXPE2Q96DL1 559 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 LRIT1Q9P2V4 623 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 PKP3Q9Y446 797 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 ARL5AQ9Y689 179 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 CHD6Q8TD26 2715 aa15.28■□□□□ 0.04
ECHDC2-223ENST00000542552 UNC13CQ8NB66 2214 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 GLYATL1P3A0A0U1RQE8 302 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 A0A1W2PQM1 296 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 A6NCN8 305 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 PRR19A6NJB7 356 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 C2orf81A6NN90 581 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 STX7O15400 261 aaKnown RBP15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 VEGFDO43915 354 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 AP2A1O95782 977 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 EML2O95834 649 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 LPOP22079 712 aaPredicted RBP15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 CA5AP35218 305 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 CLCNKAP51800 687 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 PDX1P52945 283 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 MAZP56270 477 aaKnown RBP15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 CCL7P80098 99 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 B4GALNT1Q00973 533 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 CCNG2Q16589 344 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 DRICH1Q6PGQ1 229 aaPredicted RBP15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 CHST15Q7LFX5 561 aaPredicted RBP15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 SPRED1Q7Z699 444 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 CCNJLQ8IV13 435 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 REXO1L1PQ8IX06 675 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 PATE1Q8WXA2 126 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 KCNF1Q9H3M0 494 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 LRRC40Q9H9A6 602 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 ZKSCAN5Q9Y2L8 839 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 KCTD3Q9Y597 815 aa15.27■□□□□ 0.04
ECHDC2-223ENST00000542552 A0A1W2PNU3 283 aaPredicted RBP15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 SRRM3A6NNA2 597 aaPredicted RBP15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 PSMD3O43242 534 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 LDB2O43679 373 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms