RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 KMT2EQ8IZD2 1858 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 MIA3Q5JRA6 1907 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 ANAPC1Q9H1A4 1944 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 A0A087WV62 115 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 PRAMEF33A0A0G2JMD5 474 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.55□□□□□ -1.52
CPSF7-220ENST00000541963 KCNJ18B7U540 433 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 HHLA1C9JL84 531 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF500O60304 480 aaPredicted RBP5.55□□□□□ -1.52
CPSF7-220ENST00000541963 PRAMEF10O60809 474 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 SKAP2O75563 359 aaPredicted RBP5.55□□□□□ -1.52
CPSF7-220ENST00000541963 RASAL1O95294 804 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 SP9P0CG40 484 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 ARSAP15289 507 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 USP8P40818 1118 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 NBL1P41271 181 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 ACADSBP45954 432 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 TKTL1P51854 596 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 PRKAG1P54619 331 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 OCA2Q04671 838 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 CSTF1Q05048 431 aaKnown RBP5.55□□□□□ -1.52
CPSF7-220ENST00000541963 FZD5Q13467 585 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 DYRK1AQ13627 763 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 BLMHQ13867 455 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 E2F2Q14209 437 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 KCNJ12Q14500 433 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 HLXQ14774 488 aaPredicted RBP5.55□□□□□ -1.52
CPSF7-220ENST00000541963 E2F5Q15329 346 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 DPCR1Q3MIW9 517 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 CCDC38Q502W7 563 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 TMEM196Q5HYL7 178 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 RAB41Q5JT25 222 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 C10orf120Q5SQS8 335 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 CCDC183Q5T5S1 534 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 CACHD1Q5VU97 1274 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 TRIM65Q6PJ69 517 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 ZDHHC24Q6UX98 284 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 TMEM108Q6UXF1 575 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 RSRC2Q7L4I2 434 aaKnown RBP5.55□□□□□ -1.52
CPSF7-220ENST00000541963 PIGZQ86VD9 579 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 SPARTQ8N0X7 666 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 SIX6OS1Q8N1H7 587 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 SPEM1Q8N4L4 309 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 LMO3Q8TAP4 145 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 UBA3Q8TBC4 463 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 RNF139Q8WU17 664 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 SNX19Q92543 992 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 CD101Q93033 1021 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 BOD1Q96IK1 185 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 HSFY1Q96LI6 401 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 XPO6Q96QU8 1125 aaKnown RBP5.55□□□□□ -1.52
CPSF7-220ENST00000541963 NEU1Q99519 415 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 TUBGCP2Q9BSJ2 902 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 TRIM62Q9BVG3 475 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 PTDSS2Q9BVG9 487 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 KLC2Q9H0B6 622 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 LINC00597Q9H2U6 94 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 NDST4Q9H3R1 872 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 FAM83DQ9H4H8 585 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 CD248Q9HCU0 757 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 AKIP1Q9NQ31 210 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 HPS4Q9NQG7 708 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 CNGB3Q9NQW8 809 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 OLA1Q9NTK5 396 aaKnown RBP5.55□□□□□ -1.52
CPSF7-220ENST00000541963 TMEM30AQ9NV96 361 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.55□□□□□ -1.52
CPSF7-220ENST00000541963 CTTNBP2NLQ9P2B4 639 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 WDR35Q9P2L0 1181 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 SLC39A10Q9ULF5 831 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 CHST2Q9Y4C5 530 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 WNT6Q9Y6F9 365 aa5.55□□□□□ -1.52
CPSF7-220ENST00000541963 TICRRQ7Z2Z1 1910 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 OBSL1O75147 1896 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 A0A1W2PS29 197 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 SMTNL1A8MU46 457 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 PROB1E7EW31 1015 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 M0QYV0 167 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 O00370 1275 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 SUN1O94901 812 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 APODP05090 189 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 CFIP05156 583 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 IRF1P10914 325 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 PON1P27169 355 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 CD6P30203 668 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 PRKAR1BP31321 381 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 KRT9P35527 623 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 CHKAP35790 457 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 EIF2DP41214 584 aaKnown RBP5.54□□□□□ -1.52
CPSF7-220ENST00000541963 HALP42357 657 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 PTDSS1P48651 473 aaKnown RBP5.54□□□□□ -1.52
CPSF7-220ENST00000541963 ALDH9A1P49189 494 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 HARS2P49590 506 aaKnown RBP5.54□□□□□ -1.52
CPSF7-220ENST00000541963 COPAP53621 1224 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 YWHAGP61981 247 aaKnown RBP eCLIP5.54□□□□□ -1.52
CPSF7-220ENST00000541963 CXADRP78310 365 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 EFEMP1Q12805 493 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 MTAPQ13126 283 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 STX1AQ16623 288 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 MEA1Q16626 185 aa5.54□□□□□ -1.52
CPSF7-220ENST00000541963 TCP11X2Q5H9J9 407 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms