RNA–Protein interactions for RNA: ENST00000540162.5

MRPL48-209, Transcript of mitochondrial ribosomal protein L48, human

TSL 5

Gene MRPL48, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL48-209	ENST00000540162	UBXN7	O94888	489 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	NDUFA10	O95299	355 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	C9	P02748	559 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	FTL	P02792	175 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	CCDC172	P0C7W6	258 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	SLC2A4	P14672	509 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	TCF4	P15884	667 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	ZNF30	P17039	623 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	LEPR	P48357	1165 aa	Known RBP	11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	PMS2	P54278	862 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	UBE2I	P63279	158 aa	Known RBP	11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	IL11RA	Q14626	422 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	DPYSL2	Q16555	572 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	BOLA3	Q53S33	107 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	RASGRP3	Q8IV61	690 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	TEX26	Q8N6G2	289 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	EFCAB3	Q8N7B9	438 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	FAM83D	Q9H4H8	585 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	ARFGAP3	Q9NP61	516 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	LIMA1	Q9UHB6	759 aa	Known RBP	11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	PADI1	Q9ULC6	663 aa		11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	USP9X	Q93008	2570 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL48-209	ENST00000540162	MN1	Q10571	1320 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	LILRA5	A6NI73	299 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	KIF1C	O43896	1103 aa	Known RBP	11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	NUAK1	O60285	661 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	SEMA7A	O75326	666 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	SPAG6	O75602	509 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	RASSF9	O75901	435 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	PRL	P01236	227 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	CCNYL3	P0C7X3	344 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	RARA	P10276	462 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	ZNF8	P17098	575 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	AMD1	P17707	334 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	XRCC1	P18887	633 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	PCK1	P35558	622 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	DSC2	Q02487	901 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	ZNF648	Q5T619	568 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	TXNRD3NB	Q6F5E7	133 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	PPP1R2P3	Q6NXS1	205 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	TMEM26	Q6ZUK4	368 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	PHYKPL	Q8IUZ5	450 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	GALNT11	Q8NCW6	608 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	CPT1C	Q8TCG5	803 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	SSC4D	Q8WTU2	575 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	ERGIC2	Q96RQ1	377 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	TRIM55	Q9BYV6	548 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	POLR1E	Q9GZS1	481 aa	Known RBP	11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	RMI1	Q9H9A7	625 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	KLC4	Q9NSK0	619 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	ATXN10	Q9UBB4	475 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	MYO1A	Q9UBC5	1043 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	LNPEP	Q9UIQ6	1025 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	KCND3	Q9UK17	655 aa		11.42	□□□□□ -0.58
MRPL48-209	ENST00000540162	SPEN	Q96T58	3664 aa	Known RBP	11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	NOTCH2	Q04721	2471 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	C1orf232	A0A0U1RR37	186 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	LRRC10B	A6NIK2	292 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	TOX3	O15405	576 aa	Predicted RBP	11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	RECK	O95980	971 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	VIP	P01282	170 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	RNF224	P0DH78	156 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	ATP1A3	P13637	1013 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	SLC19A1	P41440	591 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	SPINT3	P49223	89 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	CLCNKA	P51800	687 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	SEMA5A	Q13591	1074 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	DNASE1L3	Q13609	305 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	NADK2	Q4G0N4	442 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	HENMT1	Q5T8I9	393 aa	Known RBP	11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	APLF	Q8IW19	511 aa	Predicted RBP	11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	AOPEP	Q8N6M6	819 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	AVL9	Q8NBF6	648 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	LPCAT1	Q8NF37	534 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	ANKRD20A12P	Q8NF67	263 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	CT55	Q8WUE5	264 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	RUFY1	Q96T51	708 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	TDRD1	Q9BXT4	1180 aa	Known RBP	11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	OR2AG1	Q9H205	316 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	CARD9	Q9H257	536 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	OSGEPL1	Q9H4B0	414 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	ZNF768	Q9H5H4	540 aa	Known RBP	11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	UCK1	Q9HA47	277 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	PCDH9	Q9HC56	1237 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	PCDH18	Q9HCL0	1135 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	RBM22	Q9NW64	420 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	SLC23A2	Q9UGH3	650 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	DNPEP	Q9ULA0	475 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	TTLL3	Q9Y4R7	772 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	PCDHGA6	Q9Y5G7	932 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	UNC79	Q9P2D8	2635 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162	NBAS	A2RRP1	2371 aa		11.41	□□□□□ -0.58
MRPL48-209	ENST00000540162		A1L4Q6	167 aa		11.4	□□□□□ -0.58
MRPL48-209	ENST00000540162	MATN3	O15232	486 aa		11.4	□□□□□ -0.58
MRPL48-209	ENST00000540162	TIAF1	O95411	115 aa		11.4	□□□□□ -0.58
MRPL48-209	ENST00000540162	FGF5	P12034	268 aa		11.4	□□□□□ -0.58

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