RNA–Protein interactions for RNA: ENST00000539594.5

ESRRA-206, Transcript of estrogen related receptor alpha, humanhuman

TSL 3

Gene ESRRA, Length 747 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-206ENST00000539594 HOMER3Q9NSC5 361 aa27.76■■■□□ 2.03
ESRRA-206ENST00000539594 SPATS2LQ9NUQ6 558 aaKnown RBP27.76■■■□□ 2.03
ESRRA-206ENST00000539594 ATXN10Q9UBB4 475 aa27.76■■■□□ 2.03
ESRRA-206ENST00000539594 GLYATL1P3A0A0U1RQE8 302 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 GRID2O43424 1007 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 NUDT21O43809 227 aaKnown RBP27.75■■■□□ 2.03
ESRRA-206ENST00000539594 CEP104O60308 925 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 AP2A1O95782 977 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 IFNB1P01574 187 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 FDFT1P37268 417 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 CLDN6P56747 220 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 HLTFQ14527 1009 aaKnown RBP eCLIP27.75■■■□□ 2.03
ESRRA-206ENST00000539594 SIX1Q15475 284 aaPredicted RBP27.75■■■□□ 2.03
ESRRA-206ENST00000539594 ATP13A5Q4VNC0 1218 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 LINC00523Q86TU6 105 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 C17orf82Q86X59 251 aaPredicted RBP27.75■■■□□ 2.03
ESRRA-206ENST00000539594 CCDC74AQ96AQ1 378 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 GRAMD1AQ96CP6 724 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 OR2AG1Q9H205 316 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 KCNF1Q9H3M0 494 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 APPL1Q9UKG1 709 aa27.75■■■□□ 2.03
ESRRA-206ENST00000539594 DRG1Q9Y295 367 aaKnown RBP27.75■■■□□ 2.03
ESRRA-206ENST00000539594 USP12O75317 370 aa27.74■■■□□ 2.03
ESRRA-206ENST00000539594 OLIG2Q13516 323 aa27.74■■■□□ 2.03
ESRRA-206ENST00000539594 SNX1Q13596 522 aa27.74■■■□□ 2.03
ESRRA-206ENST00000539594 DENND5AQ6IQ26 1287 aa27.74■■■□□ 2.03
ESRRA-206ENST00000539594 ADGRG6Q86SQ4 1221 aa27.74■■■□□ 2.03
ESRRA-206ENST00000539594 REXO1L1PQ8IX06 675 aa27.74■■■□□ 2.03
ESRRA-206ENST00000539594 CCDC89Q8N998 374 aa27.74■■■□□ 2.03
ESRRA-206ENST00000539594 ARL5AQ9Y689 179 aa27.74■■■□□ 2.03
ESRRA-206ENST00000539594 ZNF106Q9H2Y7 1883 aaKnown RBP27.74■■■□□ 2.03
ESRRA-206ENST00000539594 TRABD2BA6NFA1 517 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 ZNF8P17098 575 aaPredicted RBP27.73■■■□□ 2.03
ESRRA-206ENST00000539594 MSLNQ13421 630 aaPredicted RBP27.73■■■□□ 2.03
ESRRA-206ENST00000539594 SPARCL1Q14515 664 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 LONRF2Q1L5Z9 754 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 FAM151BQ6UXP7 276 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 C4orf22Q6V702 233 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 CHST15Q7LFX5 561 aaPredicted RBP27.73■■■□□ 2.03
ESRRA-206ENST00000539594 MARCH9Q86YJ5 346 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 PBKQ96KB5 322 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 ZCCHC2Q9C0B9 1178 aaKnown RBP27.73■■■□□ 2.03
ESRRA-206ENST00000539594 NRSN2Q9GZP1 204 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 CCDC86Q9H6F5 360 aaKnown RBP27.73■■■□□ 2.03
ESRRA-206ENST00000539594 PAK5Q9P286 719 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 PLEKHM1Q9Y4G2 1056 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 ST14Q9Y5Y6 855 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 AKAP13Q12802 2813 aa27.73■■■□□ 2.03
ESRRA-206ENST00000539594 CHUKO15111 745 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 ZW10O43264 779 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 HADHAP40939 763 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 CHRNA6Q15825 494 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 LDLRAP1Q5SW96 308 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 RBM44Q6ZP01 1051 aaKnown RBP27.72■■■□□ 2.03
ESRRA-206ENST00000539594 OR4K2Q8NGD2 314 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 GDAP1Q8TB36 358 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 NXPE2Q96DL1 559 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 SMOXQ9NWM0 555 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 LRIT1Q9P2V4 623 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 DKK4Q9UBT3 224 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 UNC13CQ8NB66 2214 aa27.72■■■□□ 2.03
ESRRA-206ENST00000539594 BUD23O43709 281 aaKnown RBP27.71■■■□□ 2.03
ESRRA-206ENST00000539594 CDK14O94921 469 aa27.71■■■□□ 2.03
ESRRA-206ENST00000539594 SLC2A4P14672 509 aa27.71■■■□□ 2.03
ESRRA-206ENST00000539594 CXCR5P32302 372 aa27.71■■■□□ 2.03
ESRRA-206ENST00000539594 CLCNKAP51800 687 aa27.71■■■□□ 2.03
ESRRA-206ENST00000539594 GTF2H3Q13889 308 aa27.71■■■□□ 2.03
ESRRA-206ENST00000539594 SPIDRQ14159 915 aa27.71■■■□□ 2.03
ESRRA-206ENST00000539594 LRRTM4Q86VH4 590 aa27.71■■■□□ 2.03
ESRRA-206ENST00000539594 ZCCHC14Q8WYQ9 949 aaKnown RBP27.71■■■□□ 2.03
ESRRA-206ENST00000539594 TTC25Q96NG3 672 aa27.71■■■□□ 2.03
ESRRA-206ENST00000539594 ETNK1Q9HBU6 452 aa27.71■■■□□ 2.03
ESRRA-206ENST00000539594 ARFGAP3Q9NP61 516 aa27.71■■■□□ 2.03
ESRRA-206ENST00000539594 IGF2RP11717 2491 aa27.7■■■□□ 2.03
ESRRA-206ENST00000539594 NTN3O00634 580 aaPredicted RBP27.7■■■□□ 2.02
ESRRA-206ENST00000539594 KMOO15229 486 aa27.7■■■□□ 2.02
ESRRA-206ENST00000539594 KIF5CO60282 957 aa27.7■■■□□ 2.02
ESRRA-206ENST00000539594 ACP5P13686 325 aa27.7■■■□□ 2.02
ESRRA-206ENST00000539594 BIRC2Q13490 618 aa27.7■■■□□ 2.02
ESRRA-206ENST00000539594 ST3GAL2Q16842 350 aa27.7■■■□□ 2.02
ESRRA-206ENST00000539594 NAGSQ8N159 534 aa27.7■■■□□ 2.02
ESRRA-206ENST00000539594 ARL14Q8N4G2 192 aa27.7■■■□□ 2.02
ESRRA-206ENST00000539594 DDHD1Q8NEL9 900 aa27.7■■■□□ 2.02
ESRRA-206ENST00000539594 NAP1L3Q99457 506 aaPredicted RBP27.7■■■□□ 2.02
ESRRA-206ENST00000539594 TMPRSS11EQ9UL52 423 aa27.7■■■□□ 2.02
ESRRA-206ENST00000539594 PRKAB1Q9Y478 270 aa27.7■■■□□ 2.02
ESRRA-206ENST00000539594 PCYT1BQ9Y5K3 369 aaPredicted RBP27.7■■■□□ 2.02
ESRRA-206ENST00000539594 RNF215Q9Y6U7 377 aa27.7■■■□□ 2.02
ESRRA-206ENST00000539594 E7EVH7 732 aa27.69■■■□□ 2.02
ESRRA-206ENST00000539594 GAPDHSO14556 408 aaPredicted RBP27.69■■■□□ 2.02
ESRRA-206ENST00000539594 CSO75390 466 aaKnown RBP27.69■■■□□ 2.02
ESRRA-206ENST00000539594 PRAMEF1O95521 474 aa27.69■■■□□ 2.02
ESRRA-206ENST00000539594 ECEL1O95672 775 aa27.69■■■□□ 2.02
ESRRA-206ENST00000539594 GAS8O95995 478 aa27.69■■■□□ 2.02
ESRRA-206ENST00000539594 LMAN1P49257 510 aa27.69■■■□□ 2.02
ESRRA-206ENST00000539594 TMEM115Q12893 351 aaPredicted RBP27.69■■■□□ 2.02
ESRRA-206ENST00000539594 ZNF648Q5T619 568 aaPredicted RBP27.69■■■□□ 2.02
ESRRA-206ENST00000539594 CCNJLQ8IV13 435 aa27.69■■■□□ 2.02
ESRRA-206ENST00000539594 ZNF398Q8TD17 642 aa27.69■■■□□ 2.02
ESRRA-206ENST00000539594 TIMM29Q9BSF4 260 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms