RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PSAT1Q9Y617 370 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 FAM172BPA6NC97 362 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 SYCE1LA8MT33 242 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 M0QZQ0 153 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 M0R3G1 203 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 DYRK3O43781 588 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 TOMM70O94826 608 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 ALX3O95076 343 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 MBL2P11226 248 aaPredicted RBP13.91□□□□□ -0.18
LIG1-203ENST00000536218 LEPRP48357 1165 aaKnown RBP13.91□□□□□ -0.18
LIG1-203ENST00000536218 P2RX3P56373 397 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 ADCK1Q86TW2 530 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 ZNF598Q86UK7 904 aaKnown RBP13.91□□□□□ -0.18
LIG1-203ENST00000536218 EPHX4Q8IUS5 362 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 ZUFSPQ96AP4 578 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 SUSD3Q96L08 255 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 FUNDC2Q9BWH2 189 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 HCSTQ9UBK5 93 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 SUCOQ9UBS9 1254 aaKnown RBP13.91□□□□□ -0.18
LIG1-203ENST00000536218 SRRDQ9UH36 339 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 CDYLQ9Y232 598 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 PCDHGA7Q9Y5G6 932 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 COPG1Q9Y678 874 aaKnown RBP13.91□□□□□ -0.18
LIG1-203ENST00000536218 HDAC3O15379 428 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 TADA2AO75478 443 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 JUNP05412 331 aaKnown RBP13.9□□□□□ -0.18
LIG1-203ENST00000536218 ITIH1P19827 911 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 NFKB1P19838 968 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 PBX3P40426 434 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 GATMP50440 423 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 HLCSP50747 726 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 SEMA3BQ13214 749 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 HERC3Q15034 1050 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 CRY1Q16526 586 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 ZCCHC8Q6NZY4 707 aaKnown RBP13.9□□□□□ -0.18
LIG1-203ENST00000536218 OTOP3Q7RTS5 596 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 ERMP1Q7Z2K6 904 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 TTC30BQ8N4P2 665 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 ARNTL2Q8WYA1 636 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 TUBA1CQ9BQE3 449 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 GPN2Q9H9Y4 310 aaPredicted RBP13.9□□□□□ -0.18
LIG1-203ENST00000536218 NMUR1Q9HB89 426 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 STARD7Q9NQZ5 370 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 THG1LQ9NWX6 298 aaKnown RBP13.9□□□□□ -0.18
LIG1-203ENST00000536218 ADPRHL2Q9NX46 363 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 QPCTLQ9NXS2 382 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 CYP11A1P05108 521 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 PRKCGP05129 697 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 ZNF135P52742 658 aaPredicted RBP13.9□□□□□ -0.18
LIG1-203ENST00000536218 CHRNEQ04844 493 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 NOMO2Q5JPE7 1267 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 CERCAMQ5T4B2 595 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 BROXQ5VW32 411 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 TMEM236Q5W0B7 351 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 PM20D1Q6GTS8 502 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 SLC24A5Q71RS6 500 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 SFRP1Q8N474 314 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 ATAD1Q8NBU5 361 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 S100ZQ8WXG8 99 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 HDAC11Q96DB2 347 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 TXNDC15Q96J42 360 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 MAGED4Q96JG8 741 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 DEPDC7Q96QD5 511 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 IL1RL2Q9HB29 575 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 ZBTB26Q9HCK0 441 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 MPP6Q9NZW5 540 aa13.9□□□□□ -0.18
LIG1-203ENST00000536218 A0A1W2PQH9 124 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 NT5C1B-RDH14C9J2C7 533 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 SEC14L2O76054 403 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 SNAP29O95721 258 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 MT-ND1P03886 318 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 UGT2B4P06133 528 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 BMP2P12643 396 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 CCNYL2Q5T2Q4 361 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 ZNF773Q6PK81 442 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 PLD6Q8N2A8 252 aaKnown RBP13.89□□□□□ -0.19
LIG1-203ENST00000536218 TTC9BQ8N6N2 239 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 LINC01599Q8WXQ3 324 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 ZNF669Q96BR6 464 aaPredicted RBP13.89□□□□□ -0.19
LIG1-203ENST00000536218 CAB39Q9Y376 341 aaPredicted RBP13.89□□□□□ -0.19
LIG1-203ENST00000536218 TBKBP1A7MCY6 615 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 H0Y858 1186 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 PAGE1O75459 146 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 TSPAN9O75954 239 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 PIGNO95427 931 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 CD68P34810 354 aaPredicted RBP13.89□□□□□ -0.19
LIG1-203ENST00000536218 CAPGP40121 348 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 GARSP41250 739 aaKnown RBP13.89□□□□□ -0.19
LIG1-203ENST00000536218 SCAPQ12770 1279 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 NOGQ13253 232 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 PRPSAP1Q14558 356 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 ESX1Q8N693 406 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 MFSD2AQ8NA29 543 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 GLMNQ92990 594 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 CAPNS2Q96L46 248 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 DMRTB1Q96MA1 342 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 GATA5Q9BWX5 397 aaPredicted RBP13.89□□□□□ -0.19
LIG1-203ENST00000536218 CCDC90BQ9GZT6 254 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 NDFIP2Q9NV92 336 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 TBC1D13Q9NVG8 400 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms