RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 SERPINA4P29622 427 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 SCNN1AP37088 669 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 RGRP47804 291 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 PMS1P54277 932 aaKnown RBP8.13□□□□□ -1.11
CD44-232ENST00000531118 HDAC4P56524 1084 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 FKBP3Q00688 224 aaKnown RBP8.13□□□□□ -1.11
CD44-232ENST00000531118 CETN1Q12798 172 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 ART3Q13508 389 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 LRP8Q14114 963 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 CYTH1Q15438 398 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 CRB2Q5IJ48 1285 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 FAM102AQ5T9C2 384 aaPredicted RBP8.13□□□□□ -1.11
CD44-232ENST00000531118 FAM199XQ6PEV8 388 aaPredicted RBP8.13□□□□□ -1.11
CD44-232ENST00000531118 PRSS42Q7Z5A4 293 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 ZDHHC17Q8IUH5 632 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 GLIS1Q8NBF1 620 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 SH3KBP1Q96B97 665 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 ECHDC3Q96DC8 303 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 DTD2Q96FN9 168 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 SCARF2Q96GP6 870 aaPredicted RBP8.13□□□□□ -1.11
CD44-232ENST00000531118 CFAP57Q96MR6 1250 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 TGM7Q96PF1 710 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 GPR87Q9BY21 358 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 RETREG1Q9H6L5 497 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 ATP13A3Q9H7F0 1226 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 AKIRIN1Q9H9L7 192 aaPredicted RBP8.13□□□□□ -1.11
CD44-232ENST00000531118 GPAMQ9HCL2 828 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 TMEM51Q9NW97 253 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 GOLGA6AQ9NYA3 693 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 OGFRQ9NZT2 677 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 UBA2Q9UBT2 640 aaPredicted RBP8.13□□□□□ -1.11
CD44-232ENST00000531118 HPSEQ9Y251 543 aa8.13□□□□□ -1.11
CD44-232ENST00000531118 COPG1Q9Y678 874 aaKnown RBP8.13□□□□□ -1.11
CD44-232ENST00000531118 NCOA6Q14686 2063 aaPredicted RBP8.13□□□□□ -1.11
CD44-232ENST00000531118 F5H423 210 aaPredicted RBP8.12□□□□□ -1.11
CD44-232ENST00000531118 FAM72CH0Y354 149 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 TOX3O15405 576 aaPredicted RBP8.12□□□□□ -1.11
CD44-232ENST00000531118 WFS1O76024 890 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 SOD1P00441 154 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 ETV3P41162 512 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 SNX16P57768 344 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 RPS15P62841 145 aaKnown RBP8.12□□□□□ -1.11
CD44-232ENST00000531118 TUBB3Q13509 450 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 OCLNQ16625 522 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 FOXD4L6Q3SYB3 417 aaPredicted RBP8.12□□□□□ -1.11
CD44-232ENST00000531118 CCDC40Q4G0X9 1142 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 PYCR3Q53H96 274 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 RAB6CQ53S08 254 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 FAM72AQ5TYM5 149 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 FAM72DQ6L9T8 149 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 CYB5D1Q6P9G0 228 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 FOXD4L3Q6VB84 417 aaPredicted RBP8.12□□□□□ -1.11
CD44-232ENST00000531118 BNC2Q6ZN30 1099 aaPredicted RBP8.12□□□□□ -1.11
CD44-232ENST00000531118 MARK2Q7KZI7 788 aaKnown RBP8.12□□□□□ -1.11
CD44-232ENST00000531118 SLC9B2Q86UD5 537 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 TRIM74Q86UV6 250 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 FJX1Q86VR8 437 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 FAM72BQ86X60 149 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 GALNT13Q8IUC8 556 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
CD44-232ENST00000531118 HERPUD2Q9BSE4 406 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.12□□□□□ -1.11
CD44-232ENST00000531118 RAB6CQ9H0N0 254 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 PDFQ9HBH1 243 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 LATS2Q9NRM7 1088 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 AGPAT4Q9NRZ5 378 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 C5AR2Q9P296 337 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 CNOT8Q9UFF9 292 aaKnown RBP8.12□□□□□ -1.11
CD44-232ENST00000531118 OR12D3Q9UGF7 316 aa8.12□□□□□ -1.11
CD44-232ENST00000531118 A8MX80 341 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 PRMT3O60678 531 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 CPNE3O75131 537 aaKnown RBP8.11□□□□□ -1.11
CD44-232ENST00000531118 RASSF9O75901 435 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 HEXIM1O94992 359 aaKnown RBP8.11□□□□□ -1.11
CD44-232ENST00000531118 DRD2P14416 443 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 SLC2A4P14672 509 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 BPIP17213 487 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 LHCGRP22888 699 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 VIPR1P32241 457 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 PRCPP42785 496 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 CAPZBP47756 277 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 VAV2P52735 878 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 KRTAP10-9P60411 292 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 UBE2IP63279 158 aaKnown RBP8.11□□□□□ -1.11
CD44-232ENST00000531118 LRRC63Q05C16 580 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 ATP1A4Q13733 1029 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 HIF1AQ16665 826 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 KYNUQ16719 465 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 TMCO4Q5TGY1 634 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 LYPLAL1Q5VWZ2 237 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 DENND2CQ68D51 928 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 PWWP2BQ6NUJ5 590 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 GJB7Q6PEY0 223 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 TREML4Q6UXN2 200 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 CUZD1Q86UP6 607 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 NLRP8Q86W28 1048 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 CBARPQ8N350 705 aaPredicted RBP8.11□□□□□ -1.11
CD44-232ENST00000531118 PAF1Q8N7H5 531 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 RTL3Q8N8U3 475 aaKnown RBP8.11□□□□□ -1.11
CD44-232ENST00000531118 TMEM102Q8N9M5 508 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms