RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 TRMT11Q7Z4G4 463 aaKnown RBP7.21□□□□□ -1.26
CTNND1-229ENST00000531014 PTAR1Q7Z6K3 402 aaPredicted RBP7.21□□□□□ -1.26
CTNND1-229ENST00000531014 ZNF227Q86WZ6 799 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 HID1Q8IV36 788 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 ZNF709Q8N972 641 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 DNAAF1Q8NEP3 725 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 ZNF398Q8TD17 642 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 ACTRT1Q8TDG2 376 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 C15orf40Q8WUR7 153 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 NELL1Q92832 810 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 SEMA4DQ92854 862 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 SMARCD1Q96GM5 515 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 NSMCE3Q96MG7 304 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 ZFP3Q96NJ6 502 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 NECTIN4Q96NY8 510 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 CBWD1Q9BRT8 395 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 WDCPQ9H6R7 721 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 KAT8Q9H7Z6 458 aaKnown RBP7.21□□□□□ -1.26
CTNND1-229ENST00000531014 PLEKHA1Q9HB21 404 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 IL23AQ9NPF7 189 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 C1orf109Q9NX04 203 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 GMIPQ9P107 970 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 ZMYM5Q9UJ78 669 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 VANGL2Q9ULK5 521 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 RAB26Q9ULW5 256 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 LRRC37A3O60309 1634 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 PRRG1O14668 218 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 CASC3O15234 703 aaKnown RBP7.21□□□□□ -1.26
CTNND1-229ENST00000531014 ATMINO43313 823 aaPredicted RBP7.21□□□□□ -1.26
CTNND1-229ENST00000531014 RIPK2O43353 540 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 SUV39H1O43463 412 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 GMFGO60234 142 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 F9P00740 461 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 ITGB1P05556 798 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 FGFR1P11362 822 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 CYP4B1P13584 511 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 TYMPP19971 482 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 PPIBP23284 216 aaKnown RBP7.21□□□□□ -1.26
CTNND1-229ENST00000531014 PRKCHP24723 683 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 PSEN2P49810 448 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 MC1RQ01726 317 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 PCDH1Q08174 1060 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 EPHA7Q15375 998 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 SNX33Q8WV41 574 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 RAD51AP1Q96B01 352 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 SLC4A5Q9BY07 1137 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 POMKQ9H5K3 350 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 CXorf21Q9HAI6 301 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 SETD4Q9NVD3 440 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 CBY1Q9Y3M2 126 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 OR10H1Q9Y4A9 318 aa7.21□□□□□ -1.26
CTNND1-229ENST00000531014 ANXA2P2A6NMY6 339 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 F5H5T6 163 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 E2F3O00716 465 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 PRMT5O14744 637 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-229ENST00000531014 MPZL2O60487 215 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 HCN1O60741 890 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 SCN2BO60939 215 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 IL18RAPO95256 599 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 NPTXRO95502 500 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 IFNA1P01562 189 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 IFNA17P01571 189 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 ANXA2P07355 339 aaKnown RBP7.2□□□□□ -1.26
CTNND1-229ENST00000531014 VARSP26640 1264 aaKnown RBP7.2□□□□□ -1.26
CTNND1-229ENST00000531014 S100A10P60903 97 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 CD83Q01151 205 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 BAATQ14032 418 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-229ENST00000531014 GOLGA7BQ2TAP0 167 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 SBK1Q52WX2 424 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 GPR158Q5T848 1215 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 NCCRP1Q6ZVX7 275 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-229ENST00000531014 PQLC1Q8N2U9 271 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 ZSCAN1Q8NBB4 408 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 SETD6Q8TBK2 473 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 RAB2BQ8WUD1 216 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 SLC47A1Q96FL8 570 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 SLC39A3Q9BRY0 314 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 HERC2P3Q9BVR0 1158 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 MAT2BQ9NZL9 334 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 ZNF69Q9UC07 566 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 PRR12Q9ULL5 1215 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 HSPB11Q9Y547 144 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 ANKDD1BA6NHY2 528 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 ARVCFO00192 962 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 RP2O75695 350 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 LARGE1O95461 756 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 ZNF35P13682 527 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 NELFEP18615 380 aaKnown RBP7.2□□□□□ -1.26
CTNND1-229ENST00000531014 KLRC2P26717 231 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 ACSL1P33121 698 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 MTHFRP42898 656 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 GPM6BQ13491 265 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 INAVAQ3KP66 663 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 CBWD6Q4V339 395 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 TMEM31Q5JXX7 168 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 JAZF1Q86VZ6 243 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 C11orf65Q8NCR3 313 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 HLA-CQ95604 372 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 REEP2Q9BRK0 252 aa7.2□□□□□ -1.26
CTNND1-229ENST00000531014 NIF3L1Q9GZT8 377 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms