RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CFAP36Q96G28 342 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 VPS39Q96JC1 886 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 NSMCE3Q96MG7 304 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 APOOQ9BUR5 198 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 SLC13A1Q9BZW2 595 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 ANKZF1Q9H8Y5 726 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 BPIFA1Q9NP55 256 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 C2orf42Q9NWW7 574 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 ZDHHC3Q9NYG2 299 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 NCDNQ9UBB6 729 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 FKBPLQ9UIM3 349 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 MBD1Q9UIS9 605 aaPredicted RBP7.87□□□□□ -1.15
SSBP3-211ENST00000528787 SLC6A14Q9UN76 642 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 ZFR2Q9UPR6 939 aaKnown RBP7.87□□□□□ -1.15
SSBP3-211ENST00000528787 CHMP2BQ9UQN3 213 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 ITM2BQ9Y287 266 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 CUL9Q8IWT3 2517 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 PI4KAP42356 2102 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 VCANP13611 3396 aa7.87□□□□□ -1.15
SSBP3-211ENST00000528787 TRBV5-4A0A0C4DH59 114 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 SPTY2D1-AS1A0A0U1RR47 76 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 C17orf113A0A1B0GUU1 675 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 GOLGA6L10A6NI86 522 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 PRMT5O14744 637 aaPredicted RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 AURKAO14965 403 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 SPINT1O43278 529 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 KRT38O76015 456 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 CDK14O94921 469 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 GOT2P00505 430 aaKnown RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 TNFP01375 233 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 RPN2P04844 631 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 PRKCGP05129 697 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 INHBAP08476 426 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 ALPPL2P10696 532 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 CTSEP14091 401 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 ATP1B2P14415 290 aaPredicted RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 RPS3P23396 243 aaKnown RBP eCLIP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 ATP5DP30049 168 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 SLC12A2P55011 1212 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 CSE1LP55060 971 aaKnown RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 PFN3P60673 137 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 PPARDQ03181 441 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 ELOCQ15369 112 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 TTLL9Q3SXZ7 439 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 ALS2CLQ60I27 953 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 ZNF470Q6ECI4 717 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 SLC23A3Q6PIS1 610 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 Q6ZSR6 202 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 LRRTM4Q86VH4 590 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 GALNT13Q8IUC8 556 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 CILP2Q8IUL8 1156 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 CNTN4Q8IWV2 1026 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 ABCA7Q8IZY2 2146 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 RIBC1Q8N443 379 aaPredicted RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 FAM160A2Q8N612 972 aaPredicted RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 GPR26Q8NDV2 337 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 PHC3Q8NDX5 983 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 OR13C4Q8NGS5 318 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 HNRNPLLQ8WVV9 542 aaKnown RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 PIGKQ92643 395 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 GLMNQ92990 594 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 MFSD3Q96ES6 412 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 TSPAN17Q96FV3 270 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 RUFY1Q96T51 708 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 KLF6Q99612 283 aaPredicted RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 CPNE1Q99829 537 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 FUT8Q9BYC5 575 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 PARD6BQ9BYG5 372 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 GSDMCQ9BYG8 508 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 STMN4Q9H169 189 aaPredicted RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 STN1Q9H668 368 aaKnown RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 TM9SF3Q9HD45 589 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 ARFGAP3Q9NP61 516 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 TRNAU1APQ9NX07 287 aaKnown RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 KLHL42Q9P2K6 505 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 SPASTQ9UBP0 616 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 KLQ9UEF7 1012 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 GGT7Q9UJ14 662 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 SMG5Q9UPR3 1016 aaKnown RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 FNDC3AQ9Y2H6 1198 aaKnown RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 DGKBQ9Y6T7 804 aa7.86□□□□□ -1.15
SSBP3-211ENST00000528787 TNRC6BQ9UPQ9 1833 aaKnown RBP7.86□□□□□ -1.15
SSBP3-211ENST00000528787 ZCWPW2A0A1B0GU75 182 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 CCDC189A1A4V9 331 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 CCDC162PA2VCL2 907 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 PABPN1LA6NDY0 278 aaKnown RBP7.85□□□□□ -1.15
SSBP3-211ENST00000528787 OR5K4A6NMS3 321 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 E5RI56 91 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 PROB1E7EW31 1015 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 EIF3FO00303 357 aaPredicted RBP7.85□□□□□ -1.15
SSBP3-211ENST00000528787 CTIFO43310 598 aaKnown RBP7.85□□□□□ -1.15
SSBP3-211ENST00000528787 KRT37O76014 449 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 CFIP05156 583 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 APOA4P06727 396 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 ZNF883P0CG24 379 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 SDHBP21912 280 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 CD9P21926 228 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 BCKDHBP21953 392 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 ITPKAP23677 461 aa7.85□□□□□ -1.15
SSBP3-211ENST00000528787 NMBRP28336 390 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms