RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 FSD1LQ9BXM9 530 aa32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 STRADBQ9C0K7 418 aa32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 TRIM39Q9HCM9 518 aa32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 THSD1Q9NS62 852 aa32.72■■■□□ 2.83
SSSCA1-205ENST00000527920 RHPN2P1A8MT19 583 aa32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 AURKAO14965 403 aa32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 SLC25A14O95258 325 aaPredicted RBP32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 CHRNA4P43681 627 aa32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 INHBCP55103 352 aa32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 B3GNT8Q7Z7M8 397 aa32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 TTC13Q8NBP0 860 aa32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 PRR11Q96HE9 360 aaPredicted RBP32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 SLC46A1Q96NT5 459 aa32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 PPP1R2P1Q96PQ5 205 aa32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 VPS35Q96QK1 796 aa32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 C10orf88Q9H8K7 445 aa32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 PCYT1BQ9Y5K3 369 aaPredicted RBP32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 ADGRG1Q9Y653 693 aa32.71■■■□□ 2.83
SSSCA1-205ENST00000527920 A0A0U1RQJ8 604 aa32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 DDX3YO15523 660 aaKnown RBP32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 PCBP4P57723 403 aaKnown RBP32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 ZFP36L1Q07352 338 aaKnown RBP32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 COL28A1Q2UY09 1125 aa32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 AADACL2Q6P093 401 aa32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 DARS2Q6PI48 645 aaKnown RBP32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 LRRC69Q6ZNQ3 347 aa32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 HNRNPLLQ8WVV9 542 aaKnown RBP32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 DCBLD2Q96PD2 775 aa32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 TSGA10Q9BZW7 698 aa32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 ATXN10Q9UBB4 475 aa32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 AAR2Q9Y312 384 aaKnown RBP32.7■■■□□ 2.83
SSSCA1-205ENST00000527920 ITPR1Q14643 2758 aa32.7■■■□□ 2.82
SSSCA1-205ENST00000527920 GOLGA6L9A6NEM1 432 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 GRID2O43424 1007 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 PPFIA2O75334 1257 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 FTCDO95954 541 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 RBMS1P29558 406 aaKnown RBP32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 ABCG1P45844 678 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 FASLGP48023 281 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 CLCNKAP51800 687 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 ANKRD20A2Q5SQ80 823 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 ANKRD20A1Q5TYW2 823 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 ANKRD20A3Q5VUR7 823 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 C19orf48Q6RUI8 117 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 SLC25A41Q8N5S1 370 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 ZNF248Q8NDW4 579 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 PATE1Q8WXA2 126 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 HES6Q96HZ4 224 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 SPATA13Q96N96 652 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 GORASP1Q9BQQ3 440 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 IL17CQ9P0M4 197 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 CAPN6Q9Y6Q1 641 aa32.69■■■□□ 2.82
SSSCA1-205ENST00000527920 F5H423 210 aaPredicted RBP32.68■■■□□ 2.82
SSSCA1-205ENST00000527920 CHUKO15111 745 aa32.68■■■□□ 2.82
SSSCA1-205ENST00000527920 KCNN4O15554 427 aa32.68■■■□□ 2.82
SSSCA1-205ENST00000527920 B4GAT1O43505 415 aa32.68■■■□□ 2.82
SSSCA1-205ENST00000527920 VEGFDO43915 354 aa32.68■■■□□ 2.82
SSSCA1-205ENST00000527920 BIRC2Q13490 618 aa32.68■■■□□ 2.82
SSSCA1-205ENST00000527920 CHST15Q7LFX5 561 aaPredicted RBP32.68■■■□□ 2.82
SSSCA1-205ENST00000527920 SFRP1Q8N474 314 aa32.68■■■□□ 2.82
SSSCA1-205ENST00000527920 TMEM159Q96B96 161 aa32.68■■■□□ 2.82
SSSCA1-205ENST00000527920 OR2AG1Q9H205 316 aa32.68■■■□□ 2.82
SSSCA1-205ENST00000527920 PRKAB1Q9Y478 270 aa32.68■■■□□ 2.82
SSSCA1-205ENST00000527920 CDRT15L2A8MXV6 281 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 CPNE6O95741 557 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 ZNF8P17098 575 aaPredicted RBP32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 KLF1Q13351 362 aaPredicted RBP32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 SQSTM1Q13501 440 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 RANBP10Q6VN20 620 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 GLT6D1Q7Z4J2 308 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 ADGRG6Q86SQ4 1221 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 SLITRK4Q8IW52 837 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 FOXP3Q9BZS1 431 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 EPB41L5Q9HCM4 733 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 IL26Q9NPH9 171 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 PACSIN2Q9UNF0 486 aaPredicted RBP32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 UNC13CQ8NB66 2214 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 ADAMTS20P59510 1910 aa32.67■■■□□ 2.82
SSSCA1-205ENST00000527920 A6NCN8 305 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 PLD2O14939 933 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 ITGA2BP08514 1039 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 ACP5P13686 325 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 ADRA1AP35348 466 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 PRPSAP1Q14558 356 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 CLEC14AQ86T13 490 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 KLHDC8BQ8IXV7 354 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 CCDC112Q8NEF3 446 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 BLOC1S5Q8TDH9 187 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 FAM118BQ9BPY3 351 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 BPIFA1Q9NP55 256 aa32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 ATXN7L1Q9ULK2 861 aaPredicted RBP32.66■■■□□ 2.82
SSSCA1-205ENST00000527920 PPM1DO15297 605 aa32.65■■■□□ 2.82
SSSCA1-205ENST00000527920 ARHGAP6O43182 974 aa32.65■■■□□ 2.82
SSSCA1-205ENST00000527920 PTMAP06454 111 aaKnown RBP32.65■■■□□ 2.82
SSSCA1-205ENST00000527920 SLC2A4P14672 509 aa32.65■■■□□ 2.82
SSSCA1-205ENST00000527920 PSMB4P28070 264 aa32.65■■■□□ 2.82
SSSCA1-205ENST00000527920 SPAM1P38567 509 aa32.65■■■□□ 2.82
SSSCA1-205ENST00000527920 OR1D5P58170 312 aa32.65■■■□□ 2.82
SSSCA1-205ENST00000527920 RAB11FIP2Q7L804 512 aa32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms