RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 NR1I3Q14994 352 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 PLEKHG6Q3KR16 790 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 LRRN1Q6UXK5 716 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 TRMT11Q7Z4G4 463 aaKnown RBP7.21□□□□□ -1.26
CTNND1-216ENST00000527467 PTAR1Q7Z6K3 402 aaPredicted RBP7.21□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF227Q86WZ6 799 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 HID1Q8IV36 788 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF709Q8N972 641 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 DNAAF1Q8NEP3 725 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF398Q8TD17 642 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 ACTRT1Q8TDG2 376 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 C15orf40Q8WUR7 153 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 NELL1Q92832 810 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 SEMA4DQ92854 862 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 SMARCD1Q96GM5 515 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 NSMCE3Q96MG7 304 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 ZFP3Q96NJ6 502 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 NECTIN4Q96NY8 510 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 CBWD1Q9BRT8 395 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 WDCPQ9H6R7 721 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 KAT8Q9H7Z6 458 aaKnown RBP7.21□□□□□ -1.26
CTNND1-216ENST00000527467 PLEKHA1Q9HB21 404 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 IL23AQ9NPF7 189 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 C1orf109Q9NX04 203 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 GMIPQ9P107 970 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 ZMYM5Q9UJ78 669 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 VANGL2Q9ULK5 521 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 RAB26Q9ULW5 256 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 LRRC37A3O60309 1634 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 PRRG1O14668 218 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 CASC3O15234 703 aaKnown RBP7.21□□□□□ -1.26
CTNND1-216ENST00000527467 ATMINO43313 823 aaPredicted RBP7.21□□□□□ -1.26
CTNND1-216ENST00000527467 RIPK2O43353 540 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 SUV39H1O43463 412 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 GMFGO60234 142 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 F9P00740 461 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 ITGB1P05556 798 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 FGFR1P11362 822 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 CYP4B1P13584 511 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 TYMPP19971 482 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 PPIBP23284 216 aaKnown RBP7.21□□□□□ -1.26
CTNND1-216ENST00000527467 PRKCHP24723 683 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 PSEN2P49810 448 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 MC1RQ01726 317 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 PCDH1Q08174 1060 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 EPHA7Q15375 998 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 SNX33Q8WV41 574 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 RAD51AP1Q96B01 352 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 SLC4A5Q9BY07 1137 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 POMKQ9H5K3 350 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 CXorf21Q9HAI6 301 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 SETD4Q9NVD3 440 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 CBY1Q9Y3M2 126 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 OR10H1Q9Y4A9 318 aa7.21□□□□□ -1.26
CTNND1-216ENST00000527467 ANXA2P2A6NMY6 339 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 F5H5T6 163 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 E2F3O00716 465 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PRMT5O14744 637 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 MPZL2O60487 215 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 HCN1O60741 890 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 SCN2BO60939 215 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 IL18RAPO95256 599 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 NPTXRO95502 500 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 IFNA1P01562 189 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 IFNA17P01571 189 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ANXA2P07355 339 aaKnown RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 VARSP26640 1264 aaKnown RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 S100A10P60903 97 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 CD83Q01151 205 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 BAATQ14032 418 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 GOLGA7BQ2TAP0 167 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 SBK1Q52WX2 424 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 GPR158Q5T848 1215 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 NCCRP1Q6ZVX7 275 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PQLC1Q8N2U9 271 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ZSCAN1Q8NBB4 408 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 SETD6Q8TBK2 473 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 RAB2BQ8WUD1 216 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 SLC47A1Q96FL8 570 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 SLC39A3Q9BRY0 314 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 HERC2P3Q9BVR0 1158 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 MAT2BQ9NZL9 334 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF69Q9UC07 566 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PRR12Q9ULL5 1215 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 HSPB11Q9Y547 144 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ANKDD1BA6NHY2 528 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ARVCFO00192 962 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 RP2O75695 350 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 LARGE1O95461 756 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF35P13682 527 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 NELFEP18615 380 aaKnown RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 KLRC2P26717 231 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ACSL1P33121 698 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 MTHFRP42898 656 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 GPM6BQ13491 265 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 INAVAQ3KP66 663 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 CBWD6Q4V339 395 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 TMEM31Q5JXX7 168 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 JAZF1Q86VZ6 243 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 C11orf65Q8NCR3 313 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms