RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 KCNH7Q9NS40 1196 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CHST7Q9NS84 486 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 HPF1Q9NWY4 346 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TAS2R9Q9NYW1 312 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 ZSWIM5Q9P217 1185 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 SRP68Q9UHB9 627 aaKnown RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 POLG2Q9UHN1 485 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 MKLN1Q9UL63 735 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 CNOT6Q9ULM6 557 aaKnown RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 PCDHA6Q9UN73 950 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 ZFR2Q9UPR6 939 aaKnown RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 FNDC3AQ9Y2H6 1198 aaKnown RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 CBY1Q9Y3M2 126 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 TNPO3Q9Y5L0 923 aaKnown RBP5.79□□□□□ -1.48
CD44-225ENST00000527326 SNX5Q9Y5X3 404 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 HSPE1-MOB4S4R3N1 261 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 PMF1-BGLAPU3KQ54 211 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 ATRNL1Q5VV63 1379 aa5.79□□□□□ -1.48
CD44-225ENST00000527326 SPATA31A3Q5VYP0 1347 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 TRAV20A0A0B4J274 112 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 FAM92AA1XBS5 289 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 DENND3A2RUS2 1198 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 AGAP5A6NIR3 686 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 FAM170BA6NMN3 283 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 C2orf74A8MZ97 194 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 E7ENX8 843 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 F8W735 103 aaPredicted RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 WRBO00258 174 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ABCD4O14678 606 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 RGS5O15539 181 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 KCNN4O15554 427 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 PRKAB2O43741 272 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 SYNCRIPO60506 623 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 GREM1O60565 184 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 MED24O75448 989 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 APOL3O95236 402 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 IL18RAPO95256 599 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 RASAL1O95294 804 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 MED26O95402 600 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 C1QBP02746 253 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 PCCAP05165 728 aaPredicted RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 CDK1P06493 297 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 INHBAP08476 426 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 KRT19P08727 400 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 SUPT20HL2P0C7V6 817 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 KITP10721 976 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 XRCC5P13010 732 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 POU2F1P14859 743 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 CBLP22681 906 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 CHRNA5P30532 468 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 HOXA6P31267 233 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ADD2P35612 726 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 GARSP41250 739 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 GRIA1P42261 906 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ASMTP46597 345 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 QARSP47897 775 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 ACOT2P49753 483 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 NUMBP49757 651 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 GZMKP49863 264 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 CPT1AP50416 773 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 RAB13P51153 203 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 MAPK10P53779 464 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 PSMD4P55036 377 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 RAB25P57735 213 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 GPX6P59796 221 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 EEF1A1P68104 462 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 NKX3-2P78367 333 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 RBP5P82980 135 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 EEF1A2Q05639 463 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 POU5F1BQ06416 359 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 CDH17Q12864 832 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ART3Q13508 389 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 GPR50Q13585 617 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 CEACAM7Q14002 265 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 MESDQ14696 234 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 DRAP1Q14919 205 aaPredicted RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 CLCA4Q14CN2 919 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ACOX1Q15067 660 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 CHRNA2Q15822 529 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 PPP1R3AQ16821 1122 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ZNF792Q3KQV3 632 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 HSD17B12Q53GQ0 312 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 RTP2Q5QGT7 225 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 FAM26FQ5R3K3 315 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 COL13A1Q5TAT6 717 aaPredicted RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 EEF1A1P5Q5VTE0 462 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 ANGEL2Q5VTE6 544 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 XAF1Q6GPH4 301 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 PRMT9Q6P2P2 845 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 KIAA1324Q6UXG2 1013 aaKnown RBP5.78□□□□□ -1.48
CD44-225ENST00000527326 TFAP2EQ6VUC0 442 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 DPH6Q7L8W6 267 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 RRM2BQ7LG56 351 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 PKD1L3Q7Z443 1732 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 GPR142Q7Z601 462 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 SPRED1Q7Z699 444 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 RNF180Q86T96 592 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 MAPKAPK5Q8IW41 473 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 PHC2Q8IXK0 858 aa5.78□□□□□ -1.48
CD44-225ENST00000527326 THNSL1Q8IYQ7 743 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms